RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SLC25A53Q5H9E4 307 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 RETREG3Q86VR2 466 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 LILRA2Q8N149 483 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 RELL2Q8NC24 303 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 FIG4Q92562 907 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 INTS12Q96CB8 462 aaKnown RBP16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 TMEM19Q96HH6 336 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 ZNF845Q96IR2 970 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 MRGPRX4Q96LA9 322 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 TREX2Q9BQ50 279 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 NPDC1Q9NQX5 325 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 KLHL14Q9P2G3 628 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 GMEB1Q9Y692 573 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 DSPPQ9NZW4 1301 aa16.85■□□□□ 0.29
PRPF40B-206ENST00000547764 INTS1Q8N201 2190 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 PKDREJQ9NTG1 2253 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 TMEM247A6NEH6 219 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 SLC22A20A6NK97 555 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 ETV2O00321 342 aaPredicted RBP16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 ANGPT2O15123 496 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 ADAMDEC1O15204 470 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 HNRNPRO43390 633 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 NTN1O95631 604 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 DBIP07108 87 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 IL7RP16871 459 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 PPIBP23284 216 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 ME2P23368 584 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 ELK4P28324 431 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 FOXF2Q12947 444 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 GNA13Q14344 377 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 CTU2Q2VPK5 515 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 RPS26P11Q5JNZ5 115 aaPredicted RBP16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 P4HA3Q7Z4N8 544 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 CMIPQ8IY22 773 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 PEX5LQ8IYB4 626 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 GCNT2Q8N0V5 402 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 C10orf111Q8N326 155 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 DPP10Q8N608 796 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 WDR60Q8WVS4 1066 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 CNOT9Q92600 299 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 MAL2Q969L2 176 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 MARVELD3Q96A59 401 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 ADGRG7Q96K78 797 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 ZFP3Q96NJ6 502 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 IKZF5Q9H5V7 419 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 A4GALTQ9NPC4 353 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 EXOSC3Q9NQT5 275 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 SAR1AQ9NR31 198 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 CENPEQ02224 2701 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 HCFC1P51610 2035 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 MED12LQ86YW9 2145 aa16.84■□□□□ 0.29
PRPF40B-206ENST00000547764 A0A0G2JPF8 293 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 A0A0J9YW62 118 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 HNRNPCL2B2RXH8 293 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 HNRNPCL3B7ZW38 293 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 HNRNPCL1O60812 293 aaKnown RBP16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 IL18BPO95998 194 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 HNRNPCL4P0DMR1 293 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 NID1P14543 1247 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 COX6B1P14854 86 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 PGCP20142 388 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 SHC1P29353 583 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 RYKP34925 604 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 OPRM1P35372 400 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 EIF1AXP47813 144 aaKnown RBP16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 SESN3P58005 492 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 PON3Q15166 354 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 SGCBQ16585 318 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 RUNDC3AQ59EK9 446 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 ESPNLQ6ZVH7 1005 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 DHDDSQ86SQ9 333 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 ACBD4Q8NC06 268 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 OR52P1PQ8NH57 321 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 OR10D3Q8NH80 312 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 FNDC9Q8TBE3 224 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 C10orf82Q8WW14 230 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 ST8SIA1Q92185 356 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 ENKD1Q9H0I2 346 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 CELSR2Q9HCU4 2923 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 MRGBPQ9NV56 204 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 DNAJB12Q9NXW2 375 aaKnown RBP16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 ZNF175Q9Y473 711 aa16.83■□□□□ 0.28
PRPF40B-206ENST00000547764 EVPLLA8MZ36 301 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 TNFSF11O14788 317 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 ADAM11O75078 769 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 GPX2P18283 190 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 SFTPDP35247 375 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 KLF10Q13118 480 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 GCNT6Q5T4J0 391 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 MRPL2Q5T653 305 aaKnown RBP16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 VRK2Q86Y07 508 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 ATP6V1C2Q8NEY4 427 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 OR2V1Q8NHB1 315 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 TMEM234Q8WY98 164 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 KLHL15Q96M94 604 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 SPOCK3Q9BQ16 436 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 CPPED1Q9BRF8 314 aaPredicted RBP16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 BCL2L10Q9HD36 194 aa16.82■□□□□ 0.28
PRPF40B-206ENST00000547764 ACER3Q9NUN7 267 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms