RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 POU3F3P20264 500 aaPredicted RBP12.02□□□□□ -0.48
PTCH1-212ENST00000546744 HTR1FP30939 366 aa12.02□□□□□ -0.48
PTCH1-212ENST00000546744 TAS2R46P59540 309 aa12.02□□□□□ -0.48
PTCH1-212ENST00000546744 GPLD1P80108 840 aa12.02□□□□□ -0.48
PTCH1-212ENST00000546744 ZNF789Q5FWF6 425 aa12.02□□□□□ -0.48
PTCH1-212ENST00000546744 OR4C11Q6IEV9 310 aa12.02□□□□□ -0.48
PTCH1-212ENST00000546744 MAMDC2Q7Z304 686 aaPredicted RBP12.02□□□□□ -0.48
PTCH1-212ENST00000546744 BPHLQ86WA6 291 aaPredicted RBP12.02□□□□□ -0.48
PTCH1-212ENST00000546744 SIAH3Q8IW03 269 aa12.02□□□□□ -0.48
PTCH1-212ENST00000546744 FAM26EQ8N5C1 309 aa12.02□□□□□ -0.48
PTCH1-212ENST00000546744 ASB17Q8WXJ9 295 aa12.02□□□□□ -0.48
PTCH1-212ENST00000546744 SPO11Q9Y5K1 396 aa12.02□□□□□ -0.48
PTCH1-212ENST00000546744 A0A1B0GUH1 482 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 HCRTR2O43614 444 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 ASGR2P07307 311 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 LTBQ06643 244 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 C19orf57Q0VDD7 668 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 PLA2G7Q13093 441 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 GPR139Q6DWJ6 353 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 PODNL1Q6PEZ8 512 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 SH2D5Q6ZV89 423 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 SLC30A7Q8NEW0 376 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 SYNPO2LQ9H987 977 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 HSFX1Q9UBD0 423 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 ADAM29Q9UKF5 820 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 YIPF1Q9Y548 306 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 PCDHGA6Q9Y5G7 932 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 MYO18AQ92614 2054 aaKnown RBP12.02□□□□□ -0.49
PTCH1-212ENST00000546744 ZNF705GA8MUZ8 300 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-212ENST00000546744 ADRA1AP35348 466 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 RPS15AP62244 130 aaKnown RBP12.02□□□□□ -0.49
PTCH1-212ENST00000546744 RACK1P63244 317 aaKnown RBP12.02□□□□□ -0.49
PTCH1-212ENST00000546744 SRPXP78539 464 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 FAM189BP81408 668 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 CTF1Q16619 201 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 LDLRAD1Q5T700 205 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 GPR157Q5UAW9 335 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 ADGRG3Q86Y34 549 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 DTX3Q8N9I9 347 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 OR6F1Q8NGZ6 308 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 SEC61A2Q9H9S3 476 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 ENY2Q9NPA8 101 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 PRDM9Q9NQV7 894 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 TUBG2Q9NRH3 451 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 HHLA2Q9UM44 414 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 FOXE1O00358 373 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-212ENST00000546744 PGCP20142 388 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 PER3P56645 1201 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 GPR176Q14439 515 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 TEX261Q6UWH6 196 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 ZNF679Q8IYX0 411 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 OR56B2PQ8NGI1 322 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 OR1J2Q8NGS2 313 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 OLIG1Q8TAK6 271 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 SLCO4A1Q96BD0 722 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 MAP6Q96JE9 813 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 OR5M11Q96RB7 305 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 SRRQ9GZT4 340 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 VNN3Q9NY84 501 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 U3KQ87 197 aa12.02□□□□□ -0.49
PTCH1-212ENST00000546744 MROH6A6NGR9 719 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 UNCXA6NJT0 531 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 ZNF850A8MQ14 1090 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 TSPAN6O43657 245 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 FKTNO75072 461 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 MTX2O75431 263 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 LGI1O95970 557 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 F2P00734 622 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 PRKAR1BP31321 381 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 CSNK2A1P68400 391 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-212ENST00000546744 HTRA4P83105 476 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-212ENST00000546744 EXOSC2Q13868 293 aaKnown RBP12.01□□□□□ -0.49
PTCH1-212ENST00000546744 ARSIQ5FYB1 569 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 CATSPEREQ5SY80 951 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 CSNK2A3Q8NEV1 391 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 IL17RDQ8NFM7 739 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 OR4E2Q8NGC2 313 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 NIPSNAP3BQ9BS92 247 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 C1QTNF3Q9BXJ4 246 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 OR52D1Q9H346 318 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 SCPEP1Q9HB40 452 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 H0YIV9 168 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 K7EPK0 472 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 KCNK5O95279 499 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 TSPAN12O95859 305 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 ACP5P13686 325 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 RAB6AP20340 208 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 PPT1P50897 306 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 SLC26A5P58743 744 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 KIAA1024LP59773 190 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 RPS25P62851 125 aaKnown RBP12.01□□□□□ -0.49
PTCH1-212ENST00000546744 SNTB1Q13884 538 aaKnown RBP12.01□□□□□ -0.49
PTCH1-212ENST00000546744 PRAMEF8Q5VWM4 474 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 PRAMEF7Q5VXH5 474 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 CACUL1Q86Y37 369 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 NAXDQ8IW45 347 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 FAM71E2Q8N5Q1 922 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 L3MBTL4Q8NA19 623 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 C4orf36Q96KX1 117 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms