RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 TMEM151AQ8N4L1 468 aa11.2□□□□□ -0.62
SCAF11-208ENST00000546534 FBXO30Q8TB52 745 aa11.2□□□□□ -0.62
SCAF11-208ENST00000546534 ZFP90Q8TF47 636 aa11.2□□□□□ -0.62
SCAF11-208ENST00000546534 ZNF75CPQ92670 426 aaPredicted RBP11.2□□□□□ -0.62
SCAF11-208ENST00000546534 FOXN4Q96NZ1 517 aa11.2□□□□□ -0.62
SCAF11-208ENST00000546534 MRPL57Q9BQC6 102 aaKnown RBP11.2□□□□□ -0.62
SCAF11-208ENST00000546534 PIMREGQ9BSJ6 248 aa11.2□□□□□ -0.62
SCAF11-208ENST00000546534 INPP5KQ9BT40 448 aa11.2□□□□□ -0.62
SCAF11-208ENST00000546534 SOX7Q9BT81 388 aa11.2□□□□□ -0.62
SCAF11-208ENST00000546534 MRPL46Q9H2W6 279 aaKnown RBP11.2□□□□□ -0.62
SCAF11-208ENST00000546534 UBQLN4Q9NRR5 601 aa11.2□□□□□ -0.62
SCAF11-208ENST00000546534 SIRT5Q9NXA8 310 aa11.2□□□□□ -0.62
SCAF11-208ENST00000546534 SLC25A15Q9Y619 301 aa11.2□□□□□ -0.62
SCAF11-208ENST00000546534 PMF1-BGLAPU3KQ54 211 aa11.2□□□□□ -0.62
SCAF11-208ENST00000546534 MEGF8Q7Z7M0 2845 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 A0A1W2PNR3 127 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 A0A1W2PQD3 144 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 M0R1B8 84 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 NDUFS8O00217 210 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 SCDO00767 359 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 SMAD9O15198 467 aaKnown RBP11.19□□□□□ -0.62
SCAF11-208ENST00000546534 ZSCAN12O43309 604 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 OIP5O43482 229 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 SUPT7LO94864 414 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 IGHV3-9P01782 118 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 IFI6P09912 130 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 BMP4P12644 408 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 PRKAG1P54619 331 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 HSPB3Q12988 150 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 TOMM34Q15785 309 aaPredicted RBP11.19□□□□□ -0.62
SCAF11-208ENST00000546534 SWI5Q1ZZU3 235 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 UNC50Q53HI1 259 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 SPDYAQ5MJ70 313 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 BHLHB9Q6PI77 547 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 CBLN3Q6UW01 205 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 ZDHHC24Q6UX98 284 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 CDRT4Q8N9R6 151 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 SLC16A11Q8NCK7 471 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 OR6Y1Q8NGX8 325 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 ZNF382Q96SR6 550 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 C1QTNF6Q9BXI9 259 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 MYNNQ9NPC7 610 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 TIMM22Q9Y584 194 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 ATP23Q9Y6H3 246 aa11.19□□□□□ -0.62
SCAF11-208ENST00000546534 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 CIB4A0PJX0 185 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 CCT8L1PA6NM43 557 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 ZNF724A8MTY0 619 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 KIF2AO00139 706 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-208ENST00000546534 CYTIPO60759 359 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 NUDT14O95848 222 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 SLC7A1P30825 629 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 LCN1P31025 176 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 APOBEC3AP31941 199 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-208ENST00000546534 CAV1Q03135 178 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 CARTPTQ16568 116 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 DUSP5Q16690 384 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 MST1LQ2TV78 715 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 FAM174BQ3ZCQ3 159 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 IQCCQ4KMZ1 466 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 ZNF678Q5SXM1 525 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 CCNJQ5T5M9 372 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 GALNT5Q7Z7M9 940 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 NUP43Q8NFH3 380 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 PHOSPHO1Q8TCT1 267 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 ZNF524Q96C55 264 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 GIMAP5Q96F15 307 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 OTUB1Q96FW1 271 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-208ENST00000546534 SORCS2Q96PQ0 1159 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 KCNA7Q96RP8 456 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 NTMQ9P121 344 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 ICAM5Q9UMF0 924 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 POLR3HQ9Y535 204 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-208ENST00000546534 ACTL7BQ9Y614 415 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 GPC6Q9Y625 555 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-208ENST00000546534 TENM1Q9UKZ4 2725 aa11.18□□□□□ -0.62
SCAF11-208ENST00000546534 ZNF23P17027 643 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 PRKCAP17252 672 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 SRP14P37108 136 aaKnown RBP11.17□□□□□ -0.62
SCAF11-208ENST00000546534 P2RX1P51575 399 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 TEX35Q5T0J7 233 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 FBXW9Q5XUX1 488 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 SZRD1Q7Z422 152 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 UBE2J2Q8N2K1 259 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 CEP70Q8NHQ1 597 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 GPR119Q8TDV5 335 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 FBXO17Q96EF6 278 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 C16orf58Q96GQ5 468 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 EGLN2Q96KS0 407 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 TMEM237Q96Q45 408 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 NAPGQ99747 312 aaPredicted RBP11.17□□□□□ -0.62
SCAF11-208ENST00000546534 TRMOQ9BU70 441 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 FKRPQ9H9S5 495 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 CARD8Q9Y2G2 431 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 TRAF6Q9Y4K3 522 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 FKBP7Q9Y680 259 aa11.17□□□□□ -0.62
SCAF11-208ENST00000546534 MGAM2Q2M2H8 2515 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 LOC390937A0A1W2PQ73 354 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 SERTM1A2A2V5 107 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 VENTXO95231 258 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms