RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 CHP2O43745 196 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 CST1P01037 141 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 IGF2P01344 180 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 ZNF17P17021 662 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 SRD5A2P31213 254 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 RBM34P42696 430 aaKnown RBP14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 OR1E2P47887 323 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 ARHGDIAP52565 204 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 HMGA2P52926 109 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 TAS2R41P59536 307 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 NPTX1Q15818 432 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 COLEC12Q5KU26 742 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 PRAMEF20Q5VT98 475 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 DESI1Q6ICB0 168 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 SPINK14Q6IE38 97 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 CBLN3Q6UW01 205 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 DEF8Q6ZN54 512 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 Q6ZS92 163 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 PLEKHM3Q6ZWE6 761 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 GRINAQ7Z429 371 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 COMTD1Q86VU5 262 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 SVOPLQ8N434 492 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 OR2M7Q8NG81 312 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 OR2M3Q8NG83 312 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 VANGL1Q8TAA9 524 aaPredicted RBP14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 GPR119Q8TDV5 335 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 ADAMTS16Q8TE57 1224 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 C1GALT1C1Q96EU7 318 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 MRGPRX4Q96LA9 322 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 EPYCQ99645 322 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 SLC19A3Q9BZV2 496 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 REEP1Q9H902 201 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 GALNT9Q9HCQ5 603 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 ACER3Q9NUN7 267 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 ANKRD10Q9NXR5 420 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 TAS2R10Q9NYW0 307 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 A4GNTQ9UNA3 340 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 C15orf41Q9Y2V0 281 aa14.59□□□□□ -0.07
PRPF40A-212ENST00000545856 SPTA1P02549 2419 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 PCNX3Q9H6A9 2034 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 ACOT7O00154 380 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 CYP7B1O75881 506 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 H1F0P07305 194 aaKnown RBP14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 ELK4P28324 431 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 CCR4P51679 360 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 KCNAB2Q13303 367 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 RAPSNQ13702 412 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 TRAM2Q15035 370 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 RCN1Q15293 331 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 OR1Q1Q15612 314 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 ENTPD8Q5MY95 495 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 HMGN2P46Q86SG4 172 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 WDSUB1Q8N9V3 476 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 GATSQ8NAP1 163 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 OR4D11Q8NGI4 311 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 ZNF563Q8TA94 476 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 WBP1Q96G27 269 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 HS6ST2Q96MM7 605 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 FNDC11Q9BVV2 318 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 RTN4RQ9BZR6 473 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 UBQLN3Q9H347 655 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 PLA2G3Q9NZ20 509 aa14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 SPIN1Q9Y657 262 aaPredicted RBP14.58□□□□□ -0.08
PRPF40A-212ENST00000545856 PIEZO2Q9H5I5 2752 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 USP24Q9UPU5 2620 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 LOC400499M0QZD8 3231 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 hCG_2039718K7EN88 272 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 GNGT2O14610 69 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 PEX1O43933 1283 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 NUDT14O95848 222 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 GKN3PP0CG01 181 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 GP1BBP13224 206 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 ANPEPP15144 967 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 DNAJA1P31689 397 aaKnown RBP14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 APOBEC1P41238 236 aaKnown RBP14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 FOXO1Q12778 655 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 ZNF169Q14929 603 aaPredicted RBP14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.57□□□□□ -0.086e-16■□□□□ 10.2
PRPF40A-212ENST00000545856 BICRALQ6AI39 1079 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 TSEN54Q7Z6J9 526 aaKnown RBP14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 SLC22A16Q86VW1 577 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 LACC1Q8IV20 430 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 RNF113BQ8IZP6 322 aaKnown RBP14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 OR10Q1Q8NGQ4 319 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 SLC38A4Q969I6 547 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 SH3YL1Q96HL8 342 aaPredicted RBP14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 PSD2Q9BQI7 771 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 ARHGAP9Q9BRR9 750 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 ADAM19Q9H013 955 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 NMNAT1Q9HAN9 279 aaPredicted RBP14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 KRCC1Q9NPI7 259 aaPredicted RBP14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 RIMS3Q9UJD0 308 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 ITPR1Q14643 2758 aa14.57□□□□□ -0.08
PRPF40A-212ENST00000545856 MPDZO75970 2070 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 A0A1B0GWA3 101 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 FRS3O43559 492 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 TPST2O60704 377 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 BCAS1O75363 584 aaPredicted RBP14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 TIPRLO75663 272 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms