RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 SLAMF7Q9NQ25 335 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 OR14J1Q9UGF5 321 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 ADGRB1O14514 1584 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 EFCAB7A8K855 629 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 CHRM4P08173 479 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 HNRNPFP52597 415 aaKnown RBP14.51□□□□□ -0.09
CHD4-210ENST00000544040 TDGQ13569 410 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 C9orf135Q5VTT2 229 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 LIPIQ6XZB0 460 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 SVBPQ8N300 66 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 FAM109AQ8N4B1 249 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 OR9A4Q8NGU2 314 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 PIGCQ92535 297 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 RBMXL1Q96E39 390 aaKnown RBP14.51□□□□□ -0.09
CHD4-210ENST00000544040 NUDT22Q9BRQ3 303 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 TCEAL7Q9BRU2 100 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 RETREG1Q9H6L5 497 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 ZNF840PA6NDX5 716 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 UBL4AP11441 157 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 CDK4P11802 303 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 VIPR2P41587 438 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 GABRA2P47869 451 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 VEGFCP49767 419 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 EEF1A1P68104 462 aaKnown RBP14.51□□□□□ -0.09
CHD4-210ENST00000544040 MELKQ14680 651 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 UBE2NLQ5JXB2 153 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 OR5M10Q6IEU7 315 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 VRK2Q86Y07 508 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 LMO3Q8TAP4 145 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 DUSP19Q8WTR2 217 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 GSTO2Q9H4Y5 243 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 DCAF13Q9NV06 445 aaKnown RBP14.51□□□□□ -0.09
CHD4-210ENST00000544040 VAPAQ9P0L0 249 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 SLIT2O94813 1529 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 HIDE1A8MVS5 230 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 RDH16O75452 317 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 SCAF4O95104 1147 aaKnown RBP14.51□□□□□ -0.09
CHD4-210ENST00000544040 APOA2P02652 100 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 PRDX3P30048 256 aaKnown RBP14.51□□□□□ -0.09
CHD4-210ENST00000544040 RAB30Q15771 203 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 VASNQ6EMK4 673 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 SIMC1Q8NDZ2 872 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 OR4M1Q8NGD0 313 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 RSPRY1Q96DX4 576 aa14.51□□□□□ -0.09
CHD4-210ENST00000544040 GAPDHSO14556 408 aaPredicted RBP14.5□□□□□ -0.09
CHD4-210ENST00000544040 KITLGP21583 273 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 EPHA4P54764 986 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 EXOSC7Q15024 291 aaKnown RBP14.5□□□□□ -0.09
CHD4-210ENST00000544040 EBPQ15125 230 aaKnown RBP14.5□□□□□ -0.09
CHD4-210ENST00000544040 KDELC1Q6UW63 502 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 OR5H6Q8NGV6 325 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 DMRT3Q9NQL9 472 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 CA5BQ9Y2D0 317 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 CCNJQ5T5M9 372 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 FCRLAQ7L513 359 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 BPIFB2Q8N4F0 458 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 ZNF384Q8TF68 577 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 SFXN2Q96NB2 322 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 TXN2Q99757 166 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 ZFYVE21Q9BQ24 234 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 SLC12A9Q9BXP2 914 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 EGLN3Q9H6Z9 239 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 FAM53CQ9NYF3 392 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 PRAMEF27A3QJZ7 478 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 B4DXG7 233 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 NME2P22392 152 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 EFNA3P52797 238 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 ARL6IP1Q15041 203 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 PRAMEF9Q5VWM5 478 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 SLC22A25Q6T423 547 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 RNF175Q8N4F7 328 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 OR52R1Q8NGF1 315 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 BPIFA2Q96DR5 249 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 SEC22AQ96IW7 307 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 SLC19A3Q9BZV2 496 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 NAA50Q9GZZ1 169 aaKnown RBP14.5□□□□□ -0.09
CHD4-210ENST00000544040 LUZP4Q9P127 313 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 SPO11Q9Y5K1 396 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 CACNG3O60359 315 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 CD68P34810 354 aaPredicted RBP14.5□□□□□ -0.09
CHD4-210ENST00000544040 PAPD4Q6PIY7 484 aaKnown RBP14.5□□□□□ -0.09
CHD4-210ENST00000544040 UNC5DQ6UXZ4 953 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 FJX1Q86VR8 437 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 OR4Q3Q8NH05 313 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 PELI2Q9HAT8 420 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 CPNE7Q9UBL6 633 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 AFDNP55196 1824 aaKnown RBP14.5□□□□□ -0.09
CHD4-210ENST00000544040 SLIT3O75094 1523 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 A6NIZ1 184 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 SULT2B1O00204 365 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 SLC16A7O60669 478 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 APBB3O95704 486 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 RAP1BP61224 184 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 RAP1AP62834 184 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 ELAVL3Q14576 367 aaKnown RBP14.5□□□□□ -0.09
CHD4-210ENST00000544040 SLC10A1Q14973 349 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 CNN3Q15417 329 aaKnown RBP14.5□□□□□ -0.09
CHD4-210ENST00000544040 RNF151Q2KHN1 245 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 PODNL1Q6PEZ8 512 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 SERINC5Q86VE9 423 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms