RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 GID8Q9NWU2 228 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 DNAJB12Q9NXW2 375 aaKnown RBP16.6■□□□□ 0.25
COPS7A-216ENST00000543170 ALKBH4Q9NXW9 302 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 COQ3Q9NZJ6 369 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 IFT52Q9Y366 437 aa16.6■□□□□ 0.25
COPS7A-216ENST00000543170 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 LOC100653049A0A140TA62 436 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 CDHR4A6H8M9 788 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 MBD3L4A6NDZ8 208 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-216ENST00000543170 MBD3L3A6NE82 208 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-216ENST00000543170 MBD3L5A6NJ08 208 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-216ENST00000543170 CLDN24A6NM45 220 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 H3BML4 177 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 BCAS1O75363 584 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-216ENST00000543170 KRT34O76011 436 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 PGM3O95394 542 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 RAC1P63000 192 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 SCARB2Q14108 478 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 CAPRIN1Q14444 709 aaKnown RBP16.59■□□□□ 0.25
COPS7A-216ENST00000543170 LARS2Q15031 903 aaKnown RBP16.59■□□□□ 0.25
COPS7A-216ENST00000543170 QPRTQ15274 297 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 ADRM1Q16186 407 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 MRPL2Q5T653 305 aaKnown RBP16.59■□□□□ 0.25
COPS7A-216ENST00000543170 SEM1Q6ZVN7 128 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 ZNF440Q8IYI8 595 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 OR5M1Q8NGP8 315 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 MBD3L2Q8NHZ7 208 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-216ENST00000543170 NFKBIDQ8NI38 313 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 ASB5Q8WWX0 329 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 TMEM234Q8WY98 164 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 NPAS1Q99742 590 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 TUBA1CQ9BQE3 449 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 THUMPD3Q9BV44 507 aaKnown RBP16.59■□□□□ 0.25
COPS7A-216ENST00000543170 CLCF1Q9UBD9 225 aa16.59■□□□□ 0.25
COPS7A-216ENST00000543170 ZNF443Q9Y2A4 671 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-216ENST00000543170 DOCK7Q96N67 2140 aa16.58■□□□□ 0.25
COPS7A-216ENST00000543170 SHISA8B8ZZ34 492 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 FAAHO00519 579 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 CYP7B1O75881 506 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 PABPC4LP0CB38 370 aaKnown RBP16.58■□□□□ 0.24
COPS7A-216ENST00000543170 COX4I1P13073 169 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 SLC6A2P23975 617 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 CHRNB4P30926 498 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 EEF1A1P68104 462 aaKnown RBP16.58■□□□□ 0.24
COPS7A-216ENST00000543170 PMPCAQ10713 525 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 ART3Q13508 389 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 SELPLGQ14242 412 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 TOMM34Q15785 309 aaPredicted RBP16.58■□□□□ 0.24
COPS7A-216ENST00000543170 CYP51A1Q16850 503 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 NANOGP8Q6NSW7 305 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 ZNF836Q6ZNA1 936 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 HMGN2P46Q86SG4 172 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 GGNQ86UU5 652 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 PTOV1Q86YD1 416 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 SLC30A8Q8IWU4 369 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 C11orf65Q8NCR3 313 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 HIPK4Q8NE63 616 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 FBXO27Q8NI29 283 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 SLC35B4Q969S0 331 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 ARMC7Q9H6L4 198 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 NANOGQ9H9S0 305 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 ANGPT4Q9Y264 503 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 ARL2BPQ9Y2Y0 163 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 KLF2Q9Y5W3 355 aaPredicted RBP16.58■□□□□ 0.24
COPS7A-216ENST00000543170 CACNA1CQ13936 2221 aa16.58■□□□□ 0.24
COPS7A-216ENST00000543170 KIAA1549Q9HCM3 1950 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 CLCA1A8K7I4 914 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 SHOX2O60902 331 aaPredicted RBP16.57■□□□□ 0.24
COPS7A-216ENST00000543170 ME2P23368 584 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 PRDX6P30041 224 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 PRKAR1BP31321 381 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 CEACAM8P31997 349 aaPredicted RBP16.57■□□□□ 0.24
COPS7A-216ENST00000543170 CLDN15P56746 228 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 RPS3AP61247 264 aaKnown RBP16.57■□□□□ 0.24
COPS7A-216ENST00000543170 SRYQ05066 204 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 SELENBP1Q13228 472 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 MAMDC2Q7Z304 686 aaPredicted RBP16.57■□□□□ 0.24
COPS7A-216ENST00000543170 ARPINQ7Z6K5 226 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 VRK2Q86Y07 508 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 KRT73Q86Y46 540 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 TREML1Q86YW5 311 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 POU5F2Q8N7G0 328 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 CNOT9Q92600 299 aaKnown RBP16.57■□□□□ 0.24
COPS7A-216ENST00000543170 SDCCAG3Q96C92 435 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 RCN3Q96D15 328 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 CMTM5Q96DZ9 223 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 ADGRG7Q96K78 797 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 ZFP3Q96NJ6 502 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 TRIB1Q96RU8 372 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 SLC39A3Q9BRY0 314 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 SPATA5L1Q9BVQ7 753 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 TRIM8Q9BZR9 551 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 ACER3Q9NUN7 267 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 PAQR5Q9NXK6 330 aaPredicted RBP16.57■□□□□ 0.24
COPS7A-216ENST00000543170 ZNF232Q9UNY5 417 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 RNF6Q9Y252 685 aa16.57■□□□□ 0.24
COPS7A-216ENST00000543170 HSPB2A8KAH6 182 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 SEC14L5O43304 696 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 ADAM11O75078 769 aa16.56■□□□□ 0.24
COPS7A-216ENST00000543170 CLDN14O95500 239 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms