RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 RAD1O60671 282 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 SCGB2A1O75556 95 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 BMPR1AP36894 532 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 CXADRP78310 365 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 MC2RQ01718 297 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 AGAP7PQ5VUJ5 663 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 MEX3DQ86XN8 651 aaKnown RBP12.3□□□□□ -0.44
TNC-212ENST00000542877 OR52E1Q8NGJ3 308 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 OLAHQ9NV23 265 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 hCG_1807616A0A1W2PRN6 198 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 CACNG3O60359 315 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 LCATP04180 440 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 ACPPP15309 386 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 HTR3AP46098 478 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 IDH3GP51553 393 aaPredicted RBP12.29□□□□□ -0.44
TNC-212ENST00000542877 OR1Q1Q15612 314 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 SYPL1Q16563 259 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 C3orf38Q5JPI3 329 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 ZNF585AQ6P3V2 769 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 RNF113BQ8IZP6 322 aaKnown RBP12.29□□□□□ -0.44
TNC-212ENST00000542877 DNAJC5GQ8N7S2 189 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 IL17RDQ8NFM7 739 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 OR4F15Q8NGB8 312 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 BTBD2Q9BX70 525 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 TESQ9UGI8 421 aaKnown RBP12.29□□□□□ -0.44
TNC-212ENST00000542877 NAV1Q8NEY1 1877 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 NPIPA5A0A0B4J1W7 369 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 BLACEA4D250 179 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 OR52A4PA6NMU1 304 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 NPIPA7E9PJI5 369 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 ARHGAP33O14559 1287 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 ZNF217O75362 1048 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 RDH16O75452 317 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 SNAPINO95295 136 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 NPIPA8P0DM63 369 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 TIMP2P16035 220 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 ZNF26P17031 533 aaPredicted RBP12.29□□□□□ -0.44
TNC-212ENST00000542877 HOXC5Q00444 222 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 ECH1Q13011 328 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 PLK5Q496M5 336 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 FAM109AQ8N4B1 249 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 SLC6A14Q9UN76 642 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 TIMM8BQ9Y5J9 83 aaPredicted RBP12.29□□□□□ -0.44
TNC-212ENST00000542877 SLC22A7Q9Y694 548 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 SSX4O60224 188 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 NKX6-1P78426 367 aaPredicted RBP12.29□□□□□ -0.44
TNC-212ENST00000542877 NIPAL3Q6P499 406 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 NRARPQ7Z6K4 114 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 VRK2Q86Y07 508 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 SLC2A12Q8TD20 617 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 UBTD2Q8WUN7 234 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 RPL3LQ92901 407 aaKnown RBP12.29□□□□□ -0.44
TNC-212ENST00000542877 TBC1D20Q96BZ9 403 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 GLTPQ9NZD2 209 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 TRAV27A0A087WT01 109 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 H0YIV9 168 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 J3KTA2 159 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 MT-CO2P00403 227 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 POLR2HP52434 150 aaKnown RBP12.29□□□□□ -0.44
TNC-212ENST00000542877 UBE2NP61088 152 aaKnown RBP12.29□□□□□ -0.44
TNC-212ENST00000542877 CDK3Q00526 305 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 PEA15Q15121 130 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 ZNF674Q2M3X9 581 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 LDLRAD1Q5T700 205 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 KIAA0895LQ68EN5 471 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 GLB1L2Q8IW92 636 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 ESX1Q8N693 406 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 CLDN22Q8N7P3 220 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 SIMC1Q8NDZ2 872 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 OR1S1Q8NH92 325 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 ASB17Q8WXJ9 295 aa12.29□□□□□ -0.44
TNC-212ENST00000542877 DVL2O14641 736 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 ACOT8O14734 319 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 LILRB3O75022 631 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 SCG5P05408 212 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 SERPINE2P07093 398 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 LTBQ06643 244 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 DUSP7Q16829 419 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 WBP2NLQ6ICG8 309 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 TRNP1Q6NT89 227 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 PTRH1Q86Y79 214 aaKnown RBP12.28□□□□□ -0.44
TNC-212ENST00000542877 C3orf58Q8NDZ4 430 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 OR52R1Q8NGF1 315 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 TRMT2BQ96GJ1 504 aaKnown RBP12.28□□□□□ -0.44
TNC-212ENST00000542877 ZNF281Q9Y2X9 895 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 RHBDD3Q9Y3P4 386 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 ATG4BQ9Y4P1 393 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 FAM183AA6NL82 134 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 GASTP01350 101 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 CHATP28329 748 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 HOXC13P31276 330 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 RGRP47804 291 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 FOXK1P85037 733 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 PARS2Q7L3T8 475 aaKnown RBP12.28□□□□□ -0.44
TNC-212ENST00000542877 OR5T1Q8NG75 326 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 HRASLS5Q96KN8 279 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 ZNF334Q9HCZ1 680 aaPredicted RBP12.28□□□□□ -0.44
TNC-212ENST00000542877 RCE1Q9Y256 329 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 GPR39O43194 453 aa12.28□□□□□ -0.44
TNC-212ENST00000542877 GYPBP06028 91 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms