RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 C8orf82Q6P1X6 216 aaPredicted RBP8.66□□□□□ -1.02
CHFR-220ENST00000541817 BLOC1S3Q6QNY0 202 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 SHISA2Q6UWI4 295 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 DNAJC14Q6Y2X3 702 aaPredicted RBP8.66□□□□□ -1.02
CHFR-220ENST00000541817 UBE3DQ7Z6J8 389 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 ARPINQ7Z6K5 226 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 FUNDC1Q8IVP5 155 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 AQP12AQ8IXF9 295 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 MYO1HQ8N1T3 1032 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 GALNT4Q8N4A0 578 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 FAM156AQ8NDB6 213 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 OR9I1Q8NGQ6 314 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 HIST1H2AHQ96KK5 128 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 FOXN4Q96NZ1 517 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 KCNA7Q96RP8 456 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 ZNF382Q96SR6 550 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 HIST1H2AJQ99878 128 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 H2AFJQ9BTM1 129 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 SORBS1Q9BX66 1292 aaKnown RBP8.66□□□□□ -1.02
CHFR-220ENST00000541817 KRTAP17-1Q9BYP8 105 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 TRIM54Q9BYV2 358 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 PCDHAC1Q9H158 963 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 TUBB1Q9H4B7 451 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 SDR39U1Q9NRG7 319 aaPredicted RBP8.66□□□□□ -1.02
CHFR-220ENST00000541817 FAIMQ9NVQ4 179 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 AIG1Q9NVV5 245 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 ZIM2Q9NZV7 527 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 PTBP2Q9UKA9 531 aaKnown RBP8.66□□□□□ -1.02
CHFR-220ENST00000541817 GPR52Q9Y2T5 361 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 TIMM22Q9Y584 194 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 ANGPTL3Q9Y5C1 460 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 AP4B1Q9Y6B7 739 aa8.66□□□□□ -1.02
CHFR-220ENST00000541817 A0A0A6YYJ9 748 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 SYNDIG1LA6NDD5 238 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 PABPN1LA6NDY0 278 aaKnown RBP8.65□□□□□ -1.02
CHFR-220ENST00000541817 PRORSD1PA6NEY8 169 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 PPP6CO00743 305 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 DNAJA2O60884 412 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 EEDO75530 441 aaKnown RBP8.65□□□□□ -1.02
CHFR-220ENST00000541817 TNFAIP8O95379 198 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 NPPAP01160 153 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 FESP07332 822 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 FAM58BPP0C7Q3 252 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 ARAFP10398 606 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 FCGR1AP12314 374 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 ABCD3P28288 659 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 POLR2JP52435 117 aaKnown RBP8.65□□□□□ -1.02
CHFR-220ENST00000541817 CTBP2P56545 445 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 CLDN20P56880 219 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 RPP38P78345 283 aaKnown RBP8.65□□□□□ -1.02
CHFR-220ENST00000541817 IGLV3-21P80748 117 aaPredicted RBP8.65□□□□□ -1.02
CHFR-220ENST00000541817 PLIN5Q00G26 463 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 SLBPQ14493 270 aaKnown RBP eCLIP8.65□□□□□ -1.02
CHFR-220ENST00000541817 VPS26BQ4G0F5 336 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 LIN52Q52LA3 116 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 ATP6AP1LQ52LC2 224 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 SLC30A6Q6NXT4 461 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 FIGNL1Q6PIW4 674 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 UGT2A3Q6UWM9 527 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 SEZ6L2Q6UXD5 910 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 CYP2R1Q6VVX0 501 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 LILRA2Q8N149 483 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 METTL6Q8TCB7 284 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 LRTOMTQ8WZ04 291 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 RIT1Q92963 219 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 HGDQ93099 445 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 ADIPOR1Q96A54 375 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 LRRC58Q96CX6 371 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 MRPS26Q9BYN8 205 aaKnown RBP8.65□□□□□ -1.02
CHFR-220ENST00000541817 GRIP2Q9C0E4 1043 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 C8orf4Q9NR00 106 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 CBLN4Q9NTU7 201 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 ARMC1Q9NVT9 282 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 FBXO34Q9NWN3 711 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 KLHL42Q9P2K6 505 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 GIMAP2Q9UG22 337 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 IKZF3Q9UKT9 509 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 ZNF337Q9Y3M9 751 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 SNX13Q9Y5W8 968 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 GPR45Q9Y5Y3 372 aa8.65□□□□□ -1.02
CHFR-220ENST00000541817 PCNX3Q9H6A9 2034 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 SMIM31A0A1B0GVY4 71 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 ANKDD1BA6NHY2 528 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 GLOD5A6NK44 160 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 H3BML4 177 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 TRIM77I1YAP6 450 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 SLC28A1O00337 649 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 SAP18O00422 153 aaKnown RBP8.64□□□□□ -1.03
CHFR-220ENST00000541817 NME4O00746 187 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 ABCD4O14678 606 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 AKAP10O43572 662 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 UGT2B11O75310 529 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 TNFRSF21O75509 655 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 CLDN9O95484 217 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 OTCP00480 354 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 PLGP00747 810 aaPredicted RBP8.64□□□□□ -1.03
CHFR-220ENST00000541817 CT62P0C5K7 136 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 C1GALT1C1LP0DN25 315 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 UMPSP11172 480 aa8.64□□□□□ -1.03
CHFR-220ENST00000541817 PEPDP12955 493 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms