RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 GALNT5Q7Z7M9 940 aa10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 SLC16A11Q8NCK7 471 aa10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 NUP43Q8NFH3 380 aa10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 OR52N5Q8NH56 324 aa10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 C3orf49Q96BT1 292 aa10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 FOXN4Q96NZ1 517 aa10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 ZNF300Q96RE9 604 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 ANKZF1Q9H8Y5 726 aa10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 NTMQ9P121 344 aa10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 ICAM5Q9UMF0 924 aa10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 UTP11Q9Y3A2 253 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 TIMM22Q9Y584 194 aa10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 ACTL7BQ9Y614 415 aa10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 ATP23Q9Y6H3 246 aa10.22□□□□□ -0.77
CLSTN3-209ENST00000539982 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 IGHV4-61A0A0C4DH41 118 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 A0A1W2PNR3 127 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 LOC390937A0A1W2PQ73 354 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 M0R1B8 84 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 SMAD9O15198 467 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 KCNAB3O43448 404 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 RAD51DO75771 328 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 HSPA4LO95757 839 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 NUDT14O95848 222 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 ENO1P06733 434 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 ACP2P11117 423 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 ITGA2P17301 1181 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 SLC7A1P30825 629 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 GPC1P35052 558 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 P2RX1P51575 399 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 SLC7A5Q01650 507 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 HSPB3Q12988 150 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 DUSP5Q16690 384 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 IQCCQ4KMZ1 466 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 ZCCHC12Q6PEW1 402 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 CBLN3Q6UW01 205 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 IKBIPQ70UQ0 350 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 FAM76AQ8TAV0 307 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 PHOSPHO1Q8TCT1 267 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 GPR119Q8TDV5 335 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 GIMAP5Q96F15 307 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 MRGPRX4Q96LA9 322 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 MUS81Q96NY9 551 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 C1QTNF6Q9BXI9 259 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 PARD6BQ9BYG5 372 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 IQCGQ9H095 443 aaKnown RBP10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 ACSS3Q9H6R3 686 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 FKRPQ9H9S5 495 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 STK38LQ9Y2H1 464 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 FKBP7Q9Y680 259 aa10.21□□□□□ -0.77
CLSTN3-209ENST00000539982 A0A1W2PR80 420 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 CCT8L1PA6NM43 557 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 DYNC1I1O14576 645 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 DYSFO75923 2080 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 ALOX5P09917 674 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 ZNF23P17027 643 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 PRKCAP17252 672 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 EGR1P18146 543 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 TAC1P20366 129 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 IMPDH1P20839 514 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 PHBP35232 272 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 PKNOX1P55347 436 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 SUMO3P55854 103 aaPredicted RBP10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 PHC1P78364 1004 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 SELENBP1Q13228 472 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 TOMM34Q15785 309 aaPredicted RBP10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 SWI5Q1ZZU3 235 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 MST1LQ2TV78 715 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 KLHL26Q53HC5 615 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 SLC25A53Q5H9E4 307 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 CCNJQ5T5M9 372 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 OR7E24Q6IFN5 339 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 LRIG3Q6UXM1 1119 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 UBE2J2Q8N2K1 259 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 COX18Q8N8Q8 333 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 ZNF540Q8NDQ6 660 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 FBXO30Q8TB52 745 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 TRMOQ9BU70 441 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 RAB17Q9H0T7 212 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 HEATR1Q9H583 2144 aaKnown RBP10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 MYOZ1Q9NP98 299 aaPredicted RBP10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 TMEFF2Q9UIK5 374 aaPredicted RBP10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 CARD8Q9Y2G2 431 aa10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 POLR3HQ9Y535 204 aaPredicted RBP10.2□□□□□ -0.78
CLSTN3-209ENST00000539982 H3BNH8 94 aa10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 GTPBP1O00178 669 aaKnown RBP10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 PDPK1O15530 556 aa10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 OIP5O43482 229 aa10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 IGHV3-9P01782 118 aa10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 INHBAP08476 426 aa10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 SRP14P37108 136 aaKnown RBP10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 SERPINB9P50453 376 aa10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 LCP2Q13094 533 aa10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 PDK3Q15120 406 aa10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 GABRA6Q16445 453 aa10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 CARTPTQ16568 116 aa10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 FAM174BQ3ZCQ3 159 aa10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 NOXRED1Q6NXP6 359 aa10.19□□□□□ -0.78
CLSTN3-209ENST00000539982 WDR93Q6P2C0 686 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms