RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	ACKR4	Q9NPB9	350 aa		12.89	□□□□□ -0.35
POLE-208	ENST00000535934	COQ3	Q9NZJ6	369 aa		12.89	□□□□□ -0.35
POLE-208	ENST00000535934	POU2F3	Q9UKI9	436 aa		12.89	□□□□□ -0.35
POLE-208	ENST00000535934	UTS2R	Q9UKP6	389 aa		12.89	□□□□□ -0.35
POLE-208	ENST00000535934	BOK	Q9UMX3	212 aa	Predicted RBP	12.89	□□□□□ -0.35
POLE-208	ENST00000535934	KDM4E	B2RXH2	506 aa	Predicted RBP	12.88	□□□□□ -0.35
POLE-208	ENST00000535934	EI24	O14681	340 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	TP53I11	O14683	189 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	BCKDK	O14874	412 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	PCDH7	O60245	1069 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	IGFBP2	P18065	325 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	CRHBP	P24387	322 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	CHRNB4	P30926	498 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	PRIM2	P49643	509 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	SMUG1	Q53HV7	270 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	LIX1L	Q8IVB5	337 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	SPART	Q8N0X7	666 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	ZNF555	Q8NEP9	628 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	OR52R1	Q8NGF1	315 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	NEIL3	Q8TAT5	605 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	SUN5	Q8TC36	379 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	KAT2A	Q92830	837 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	TREX2	Q9BQ50	279 aa	Predicted RBP	12.88	□□□□□ -0.35
POLE-208	ENST00000535934	FAIM2	Q9BWQ8	316 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	SIAE	Q9HAT2	523 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	ALKBH4	Q9NXW9	302 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	EHD3	Q9NZN3	535 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	AKAP9	Q99996	3911 aa		12.88	□□□□□ -0.35
POLE-208	ENST00000535934	ANKRD17	O75179	2603 aa	Known RBP	12.88	□□□□□ -0.35
POLE-208	ENST00000535934	GNG14	A0A1W2PPG7	69 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	C2orf72	A6NCS6	295 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	FAM90A27P	A6NNH2	459 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	UPK1B	O75841	260 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	NPPA	P01160	153 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	APOA1	P02647	267 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	CCDC159	P0C7I6	412 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	ATP6V1B2	P21281	511 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	PTGDS	P41222	190 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	IFITM2	Q01629	132 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	MVK	Q03426	396 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	ACSM2A	Q08AH3	577 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	ZNF628	Q5EBL2	1059 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	TMEM198	Q66K66	360 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	ACSM2B	Q68CK6	577 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	SIGIRR	Q6IA17	410 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	ZNF544	Q6NX49	715 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	SEM1	Q6ZVN7	128 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	GDF7	Q7Z4P5	450 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	SPERT	Q8NA61	448 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	RHOXF1	Q8NHV9	184 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
POLE-208	ENST00000535934	AGR3	Q8TD06	166 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	ASB5	Q8WWX0	329 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	HGD	Q93099	445 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	EXOSC8	Q96B26	276 aa	Known RBP	12.87	□□□□□ -0.35
POLE-208	ENST00000535934	NODAL	Q96S42	347 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	SPOCK3	Q9BQ16	436 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	SLA2	Q9H6Q3	261 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	RUBCNL	Q9H714	662 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	EXO5	Q9H790	373 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934	EXO1	Q9UQ84	846 aa	Known RBP	12.87	□□□□□ -0.35
POLE-208	ENST00000535934	ZNF780B	Q9Y6R6	833 aa		12.87	□□□□□ -0.35
POLE-208	ENST00000535934		A0A0G2JNJ9	132 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	SERTM1	A2A2V5	107 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	FIGNL2	A6NMB9	653 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	ZNF99	A8MXY4	864 aa	Predicted RBP	12.86	□□□□□ -0.35
POLE-208	ENST00000535934	ANGPT2	O15123	496 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	PPM1B	O75688	479 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	THRB	P10828	461 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	DRD2	P14416	443 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	GDF1	P27539	372 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	TIA1	P31483	386 aa	Known RBP eCLIP	12.86	□□□□□ -0.35
POLE-208	ENST00000535934	NRG3	P56975	720 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	EEFSEC	P57772	596 aa	Known RBP	12.86	□□□□□ -0.35
POLE-208	ENST00000535934	CD300C	Q08708	224 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	DAG1	Q14118	895 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	RFX4	Q33E94	735 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	SPIN4	Q56A73	249 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	CCNJ	Q5T5M9	372 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	MEX3B	Q6ZN04	569 aa	Known RBP	12.86	□□□□□ -0.35
POLE-208	ENST00000535934	ASCC1	Q8N9N2	400 aa	Known RBP	12.86	□□□□□ -0.35
POLE-208	ENST00000535934	OR10Q1	Q8NGQ4	319 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	OR9A2	Q8NGT5	310 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	ZNF566	Q969W8	418 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	SARAF	Q96BY9	339 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	OMA1	Q96E52	524 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	LCOR	Q96JN0	433 aa	Predicted RBP	12.86	□□□□□ -0.35
POLE-208	ENST00000535934	LURAP1	Q96LR2	239 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	SECISBP2	Q96T21	854 aa	Known RBP	12.86	□□□□□ -0.35
POLE-208	ENST00000535934	MMP27	Q9H306	513 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	GALNT9	Q9HCQ5	603 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934		Q9UFV3	132 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	GPR55	Q9Y2T6	319 aa	Predicted RBP	12.86	□□□□□ -0.35
POLE-208	ENST00000535934	RBMX2	Q9Y388	322 aa	Known RBP	12.86	□□□□□ -0.35
POLE-208	ENST00000535934	CCL27	Q9Y4X3	112 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	HCFC1	P51610	2035 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	SNX4	O95219	450 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	ANXA4	P09525	319 aa	Predicted RBP	12.86	□□□□□ -0.35
POLE-208	ENST00000535934	TRAPPC2	P0DI81	140 aa		12.86	□□□□□ -0.35
POLE-208	ENST00000535934	TRAPPC2B	P0DI82	140 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms