RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 ZNF559Q9BR84 538 aa12.79□□□□□ -0.36
CMTM1-217ENST00000533666 TSPAN10Q9H1Z9 355 aaPredicted RBP12.79□□□□□ -0.36
CMTM1-217ENST00000533666 LRMDAQ9H2I8 198 aa12.79□□□□□ -0.36
CMTM1-217ENST00000533666 SERINC1Q9NRX5 453 aa12.79□□□□□ -0.36
CMTM1-217ENST00000533666 SELENONQ9NZV5 590 aa12.79□□□□□ -0.36
CMTM1-217ENST00000533666 RPS6KB2Q9UBS0 482 aa12.79□□□□□ -0.36
CMTM1-217ENST00000533666 VDAC3Q9Y277 283 aa12.79□□□□□ -0.36
CMTM1-217ENST00000533666 NTNG1Q9Y2I2 539 aa12.79□□□□□ -0.36
CMTM1-217ENST00000533666 GTF3C1Q12789 2109 aa12.79□□□□□ -0.36
CMTM1-217ENST00000533666 ZNF462Q96JM2 2506 aa12.79□□□□□ -0.36
CMTM1-217ENST00000533666 PCNX3Q9H6A9 2034 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 A0A1B0GVC2 190 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 AQP7O14520 342 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 GCM2O75603 506 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-217ENST00000533666 LGI1O95970 557 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 ACTL6AO96019 429 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 SERPINA1P01009 418 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 OPN1SWP03999 348 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 FESP07332 822 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 CHMP24386 653 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 FKBP2P26885 142 aaKnown RBP12.78□□□□□ -0.36
CMTM1-217ENST00000533666 MST1P26927 711 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 IFNA8P32881 189 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 EPS8Q12929 822 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 TRAP1Q12931 704 aaKnown RBP12.78□□□□□ -0.36
CMTM1-217ENST00000533666 QPRTQ15274 297 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 SF3B4Q15427 424 aaKnown RBP eCLIP12.78□□□□□ -0.36
CMTM1-217ENST00000533666 DUSP7Q16829 419 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 PLPPR5Q32ZL2 321 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 PRR30Q53SZ7 412 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-217ENST00000533666 WIPI1Q5MNZ9 446 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-217ENST00000533666 WBP2NLQ6ICG8 309 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 GFRALQ6UXV0 394 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 FKBP9P1Q75LS8 142 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 DHFR2Q86XF0 187 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 GTPBP8Q8N3Z3 284 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-217ENST00000533666 FAM156AQ8NDB6 213 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 ST6GALNAC3Q8NDV1 305 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 OR52E4Q8NGH9 312 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 ASB9Q96DX5 294 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 TPD52L3Q96J77 140 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 TRIM2Q9C040 744 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 TMEM27Q9HBJ8 222 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 ACER3Q9NUN7 267 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 ACTR3BQ9P1U1 418 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 TESQ9UGI8 421 aaKnown RBP12.78□□□□□ -0.36
CMTM1-217ENST00000533666 PACSIN3Q9UKS6 424 aa12.78□□□□□ -0.36
CMTM1-217ENST00000533666 SPIN1Q9Y657 262 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-217ENST00000533666 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 GJE1A6NN92 205 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 AP3D1O14617 1153 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 BCKDKO14874 412 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 ARPC2O15144 300 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 GSC2O15499 205 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 OIP5O43482 229 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 ZIC3O60481 467 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 FMO6PO60774 539 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 PDE5AO76074 875 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 PRB1P04280 392 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 CELA3AP09093 270 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 NCK1P16333 377 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 CD247P20963 164 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 ELK4P28324 431 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 SLC1A3P43003 542 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 IDH2P48735 452 aaKnown RBP12.77□□□□□ -0.37
CMTM1-217ENST00000533666 MAP2K6P52564 334 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 CASP6P55212 293 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 TLE1Q04724 770 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 NHSL2Q5HYW2 709 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 ARSKQ6UWY0 536 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 CBLL1Q75N03 491 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 GRINAQ7Z429 371 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 YTHDF3Q7Z739 585 aaKnown RBP12.77□□□□□ -0.37
CMTM1-217ENST00000533666 GEMIN6Q8WXD5 167 aaKnown RBP12.77□□□□□ -0.37
CMTM1-217ENST00000533666 ABTB1Q969K4 478 aaPredicted RBP12.77□□□□□ -0.37
CMTM1-217ENST00000533666 CCDC124Q96CT7 223 aaKnown RBP12.77□□□□□ -0.37
CMTM1-217ENST00000533666 SLC6A15Q9H2J7 730 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 PLSCR2Q9NRY7 297 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 DCAF13Q9NV06 445 aaKnown RBP12.77□□□□□ -0.37
CMTM1-217ENST00000533666 ACAD8Q9UKU7 415 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 RPH3AQ9Y2J0 694 aaPredicted RBP12.77□□□□□ -0.37
CMTM1-217ENST00000533666 SH3GLB1Q9Y371 365 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 AP4B1Q9Y6B7 739 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 POLEQ07864 2286 aa12.77□□□□□ -0.37
CMTM1-217ENST00000533666 NCKAP5O14513 1909 aa12.76□□□□□ -0.37
CMTM1-217ENST00000533666 SHANK1Q9Y566 2161 aa12.76□□□□□ -0.37
CMTM1-217ENST00000533666 C17orf51A8MQB3 221 aa12.76□□□□□ -0.37
CMTM1-217ENST00000533666 PRRG2O14669 202 aa12.76□□□□□ -0.37
CMTM1-217ENST00000533666 TPST1O60507 370 aa12.76□□□□□ -0.37
CMTM1-217ENST00000533666 IFNW1P05000 195 aa12.76□□□□□ -0.37
CMTM1-217ENST00000533666 GKN3PP0CG01 181 aa12.76□□□□□ -0.37
CMTM1-217ENST00000533666 PEPDP12955 493 aa12.76□□□□□ -0.37
CMTM1-217ENST00000533666 ABOP16442 354 aa12.76□□□□□ -0.37
CMTM1-217ENST00000533666 PRKCAP17252 672 aa12.76□□□□□ -0.37
CMTM1-217ENST00000533666 HOXB6P17509 224 aaKnown RBP12.76□□□□□ -0.37
CMTM1-217ENST00000533666 TCEA1P23193 301 aaKnown RBP12.76□□□□□ -0.37
CMTM1-217ENST00000533666 PTGS2P35354 604 aa12.76□□□□□ -0.37
CMTM1-217ENST00000533666 MSX2P35548 267 aaPredicted RBP12.76□□□□□ -0.37
CMTM1-217ENST00000533666 APOBEC1P41238 236 aaKnown RBP12.76□□□□□ -0.37
CMTM1-217ENST00000533666 TDGF1P3P51864 188 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms