RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 OR10H3O60404 316 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 SRPX2O60687 465 aaPredicted RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 RDH16O75452 317 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 OR4F21O95013 312 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 SCGB1D1O95968 90 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 RPLP0P05388 317 aaKnown RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 CRYBA1P05813 215 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 NMBP08949 121 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 HOXB5P09067 269 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 HOXC6P09630 235 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 OR52Z1P0C646 297 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 RGPD1P0DJD0 1748 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 GIMD1P0DJR0 217 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 CALCBP10092 127 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 ANXA3P12429 323 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 GTF2F2P13984 249 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 FOLR1P15328 257 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 CREB1P16220 341 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 PPP3CBP16298 524 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 ATP6V1B2P21281 511 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 TBXA2RP21731 343 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 RPS3P23396 243 aaKnown RBP eCLIP5.1□□□□□ -1.59
CD44-236ENST00000533222 NR2F2P24468 414 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 IVDP26440 423 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 KLRC1P26715 233 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 S100A2P29034 98 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 GKP32189 559 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 RPA3P35244 121 aaPredicted RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 PSMB10P40306 273 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 P2RY2P41231 377 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 PPOXP50336 477 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 TNFSF10P50591 281 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 RGS8P57771 180 aaPredicted RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 DNAJB13P59910 316 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 SNRPEP62304 92 aaKnown RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 PPP3R1P63098 170 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 HSF1Q00613 529 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 PMP22Q01453 160 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 TNFRSF17Q02223 184 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 EMX1Q04741 257 aaPredicted RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 MAPK11Q15759 364 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 NEDD8Q15843 81 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 ATP6V1FQ16864 119 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 IMPG1Q17R60 797 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 ADPRMQ3LIE5 342 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 TIMM50Q3ZCQ8 353 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 MPPE1Q53F39 396 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 FNDC7Q5VTL7 733 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 OR4F3Q6IEY1 312 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 ETFRF1Q6IPR1 90 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 ARMCX2Q7L311 632 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 NDUFAF7Q7L592 441 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 PID1Q7Z2X4 250 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 ANKRD33Q7Z3H0 272 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 UNC93AQ86WB7 457 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 PAQR7Q86WK9 346 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 ZNF573Q86YE8 665 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 PDZD9Q8IXQ8 264 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 C4orf32Q8N8J7 132 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 OR8J3Q8NGG0 315 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 OR10A6Q8NH74 314 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 GLMPQ8WWB7 406 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 RORBQ92753 470 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 SPSB4Q96A44 273 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 C3orf30Q96M34 536 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 C12orf66Q96MD2 445 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 MCCC1Q96RQ3 725 aaPredicted RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 GAD1Q99259 594 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 MTERF1Q99551 399 aaKnown RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 LPAR4Q99677 370 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 CMKLR1Q99788 373 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 TMEM47Q9BQJ4 181 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 PIGQQ9BRB3 760 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 FEM1AQ9BSK4 669 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 THUMPD3Q9BV44 507 aaKnown RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 SLC46A2Q9BY10 475 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 POLDIP3Q9BY77 421 aaKnown RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 ACTRT3Q9BYD9 372 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 IL25Q9H293 177 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 RGCCQ9H4X1 137 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 DHX35Q9H5Z1 703 aaKnown RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 AUNIPQ9H7T9 357 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 LPAR2Q9HBW0 351 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 RBFOX1Q9NWB1 397 aaKnown RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 AURKAIP1Q9NWT8 199 aaPredicted RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 MRPL22Q9NWU5 206 aaKnown RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 RIMBP3Q9UFD9 1639 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 ING1Q9UK53 422 aaPredicted RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 UTS2RQ9UKP6 389 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 PRG3Q9Y2Y8 225 aaPredicted RBP5.1□□□□□ -1.59
CD44-236ENST00000533222 PCDHGA5Q9Y5G8 931 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 KLK4Q9Y5K2 254 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 CAMTA1Q9Y6Y1 1673 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 U3KQV3 271 aa5.1□□□□□ -1.59
CD44-236ENST00000533222 DENND4AQ7Z401 1863 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 SCN11AQ9UI33 1791 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 C4AP0C0L4 1744 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 C4BP0C0L5 1744 aa5.09□□□□□ -1.59
CD44-236ENST00000533222 USP6P35125 1406 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms