RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 SLC35A3Q9Y2D2 325 aa12.55□□□□□ -0.4
TSPAN4-220ENST00000532375 A0A0G2JPF8 293 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 A0A0J9YW62 118 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 HNRNPCL2B2RXH8 293 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 HNRNPCL3B7ZW38 293 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 H3BML4 177 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 ANGPT2O15123 496 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 ADAMDEC1O15204 470 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 SNX3O60493 162 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 HNRNPCL1O60812 293 aaKnown RBP12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 GCM2O75603 506 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 PGM3O95394 542 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 DBIP07108 87 aaKnown RBP12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 UBTFL6P0CB48 400 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 HNRNPCL4P0DMR1 293 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 POU3F2P20265 443 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 PPIBP23284 216 aaKnown RBP12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 EIF1P41567 113 aaKnown RBP12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 ZNF41P51814 821 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 ZNF136P52737 540 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 CRISP3P54108 245 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 SESN3P58005 492 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 EEF1A1P68104 462 aaKnown RBP12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 QPRTQ15274 297 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 SF3B4Q15427 424 aaKnown RBP eCLIP12.54□□□□□ -0.44e-7■■■■■ 33.9
TSPAN4-220ENST00000532375 COQ5Q5HYK3 327 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 VRK2Q86Y07 508 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 PTOV1Q86YD1 416 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 CMIPQ8IY22 773 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 UBQLNLQ8IYU4 475 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 OR52P1PQ8NH57 321 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 ASB5Q8WWX0 329 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 WNT2BQ93097 391 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 ZNF845Q96IR2 970 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 MRGPRX4Q96LA9 322 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 ELAC2Q9BQ52 826 aaKnown RBP12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 CCDC106Q9BWC9 280 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 MYLK2Q9H1R3 596 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 ACER3Q9NUN7 267 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 RLIMQ9NVW2 624 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 COQ3Q9NZJ6 369 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 CALML5Q9NZT1 146 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 ARMCX1Q9P291 453 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 GPC6Q9Y625 555 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 CRYBG3Q68DQ2 2970 aa12.54□□□□□ -0.4
TSPAN4-220ENST00000532375 CACNA1DQ01668 2161 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 LOC100653049A0A140TA62 436 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 CDHR4A6H8M9 788 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 GMNCA6NCL1 334 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 H0Y3Z8 333 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 AP3D1O14617 1153 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 SLC22A2O15244 555 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 KRT34O76011 436 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 RCBTB2O95199 551 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 OPN1LWP04000 364 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 HTR1EP28566 365 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 ACAA2P42765 397 aaKnown RBP12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 HPCAP84074 193 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 FOXF2Q12947 444 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 CBFBQ13951 182 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 CAPRIN1Q14444 709 aaKnown RBP12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 MRPL2Q5T653 305 aaKnown RBP12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 SP5Q6BEB4 398 aaPredicted RBP12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 NANOGP8Q6NSW7 305 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 ZNF836Q6ZNA1 936 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 SPATA21Q7Z572 469 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 NET1Q7Z628 596 aaPredicted RBP12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 PIGWQ7Z7B1 504 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 LSRQ86X29 649 aaPredicted RBP12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 SNX32Q86XE0 403 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 TREML1Q86YW5 311 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 GRAMD2AQ8IUY3 354 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 CLIP4Q8N3C7 705 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 RELL2Q8NC24 303 aaPredicted RBP12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 OR10Q1Q8NGQ4 319 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 WDR60Q8WVS4 1066 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 ST8SIA1Q92185 356 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 FIG4Q92562 907 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 KAT8Q9H7Z6 458 aaKnown RBP12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 NANOGQ9H9S0 305 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 NPDC1Q9NQX5 325 aaPredicted RBP12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 MRGBPQ9NV56 204 aa12.53□□□□□ -0.4
TSPAN4-220ENST00000532375 NAV2Q8IVL1 2488 aa12.52□□□□□ -0.4
TSPAN4-220ENST00000532375 CELSR2Q9HCU4 2923 aa12.52□□□□□ -0.4
TSPAN4-220ENST00000532375 NKX2-6A6NCS4 301 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 HSPB2A8KAH6 182 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 EVPLLA8MZ36 301 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 FAM47E-STBD1D6RA91 191 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 PRSS44E7EML9 344 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 CYP7B1O75881 506 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 NUDT14O95848 222 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 THBS1P07996 1170 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 ETS2P15036 469 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 IL7RP16871 459 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 ELK4P28324 431 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 MTPNP58546 118 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 CDK6Q00534 326 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 NFYCQ13952 458 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 HSPB2Q16082 182 aa12.52□□□□□ -0.41
TSPAN4-220ENST00000532375 TRMT5Q32P41 509 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms