RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PEPDP12955 493 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 RNH1P13489 461 aaKnown RBP15.9■□□□□ 0.14
BRCA2-204ENST00000530893 HK1P19367 917 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 FUT1P19526 365 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 PTNP21246 168 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 EVX1P49640 407 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 PSMD4P55036 377 aaKnown RBP15.9■□□□□ 0.14
BRCA2-204ENST00000530893 ACTC1P68032 377 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 ACTA1P68133 377 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 PRTGQ2VWP7 1150 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 ARHGAP11AQ6P4F7 1023 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 THSD4Q6ZMP0 1018 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 TMEM91Q6ZNR0 172 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 ZNF550Q7Z398 422 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 CMIPQ8IY22 773 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 ZNF595Q8IYB9 648 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 AVL9Q8NBF6 648 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 SMRP1Q8NCR6 262 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 RIT1Q92963 219 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 MSANTD3Q96H12 275 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 RBM18Q96H35 190 aaKnown RBP15.9■□□□□ 0.14
BRCA2-204ENST00000530893 ZNF578Q96N58 590 aaPredicted RBP15.9■□□□□ 0.14
BRCA2-204ENST00000530893 NEDD4LQ96PU5 975 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 DEPDC7Q96QD5 511 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 DCLRE1CQ96SD1 692 aaKnown RBP15.9■□□□□ 0.14
BRCA2-204ENST00000530893 CTRCQ99895 268 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 NDC1Q9BTX1 674 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 STARD5Q9NSY2 213 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 DNAJB12Q9NXW2 375 aaKnown RBP15.9■□□□□ 0.14
BRCA2-204ENST00000530893 UNC80Q8N2C7 3258 aa15.9■□□□□ 0.14
BRCA2-204ENST00000530893 CTNSO60931 367 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 IFNGP01579 166 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 CELA2BP08218 269 aaPredicted RBP15.89■□□□□ 0.13
BRCA2-204ENST00000530893 SLC6A6P31641 620 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 LTBRP36941 435 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 ACAA2P42765 397 aaKnown RBP15.89■□□□□ 0.13
BRCA2-204ENST00000530893 EMDP50402 254 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 PPP1CAP62136 330 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 IGLV3-21P80748 117 aaPredicted RBP15.89■□□□□ 0.13
BRCA2-204ENST00000530893 GAS6Q14393 721 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 ZNF141Q15928 474 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 KLHL12Q53G59 568 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 LCN1P1Q5VSP4 162 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 ZAR1Q86SH2 424 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 OAFQ86UD1 273 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 RDH10Q8IZV5 341 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 OR6F1Q8NGZ6 308 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 ZDHHC1Q8WTX9 485 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 VSTM2LQ96N03 204 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 TIMP4Q99727 224 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 G6PC3Q9BUM1 346 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 MED20Q9H944 212 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 FLRT3Q9NZU0 649 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 ZNF221Q9UK13 617 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 PCDHGB7Q9Y5F8 929 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 CCDC182A6NF36 153 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 TTC36A6NLP5 189 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 PLPP2O43688 288 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 SLC2A5P22732 501 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 CAV3P56539 151 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 STX4Q12846 297 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 ALG10BQ5I7T1 473 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 ZNF362Q5T0B9 420 aaPredicted RBP15.89■□□□□ 0.13
BRCA2-204ENST00000530893 COL13A1Q5TAT6 717 aaPredicted RBP15.89■□□□□ 0.13
BRCA2-204ENST00000530893 RSBN1Q5VWQ0 802 aaPredicted RBP15.89■□□□□ 0.13
BRCA2-204ENST00000530893 ULK3Q6PHR2 472 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 CNIH2Q6PI25 160 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 LINC00114Q6XXX2 140 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 DGAT2L6Q6ZPD8 337 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 ZNF438Q7Z4V0 828 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 PARGQ86W56 976 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 MCATQ8IVS2 390 aaKnown RBP15.89■□□□□ 0.13
BRCA2-204ENST00000530893 SFTPA2Q8IWL1 248 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 SHISA5Q8N114 240 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 SLC44A3Q8N4M1 653 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 TMEM99Q8N816 258 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 OR5W2Q8NH69 310 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 GRHL3Q8TE85 626 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 KCTD12Q96CX2 325 aaKnown RBP15.89■□□□□ 0.13
BRCA2-204ENST00000530893 TOE1Q96GM8 510 aaKnown RBP15.89■□□□□ 0.13
BRCA2-204ENST00000530893 HCAR1Q9BXC0 346 aa15.89■□□□□ 0.13
BRCA2-204ENST00000530893 CD8B2A6NJW9 211 aa15.88■□□□□ 0.13
BRCA2-204ENST00000530893 HCRTR1O43613 425 aa15.88■□□□□ 0.13
BRCA2-204ENST00000530893 PRAMEF2O60811 474 aa15.88■□□□□ 0.13
BRCA2-204ENST00000530893 RFPL3O75679 317 aa15.88■□□□□ 0.13
BRCA2-204ENST00000530893 SBK2P0C263 348 aa15.88■□□□□ 0.13
BRCA2-204ENST00000530893 CD8BP10966 210 aa15.88■□□□□ 0.13
BRCA2-204ENST00000530893 SLC2A2P11168 524 aaPredicted RBP15.88■□□□□ 0.13
BRCA2-204ENST00000530893 RPS7P62081 194 aaKnown RBP15.88■□□□□ 0.13
BRCA2-204ENST00000530893 FGFBP1Q14512 234 aa15.88■□□□□ 0.13
BRCA2-204ENST00000530893 TAB1Q15750 504 aa15.88■□□□□ 0.13
BRCA2-204ENST00000530893 ZNF542PQ5EBM4 170 aa15.88■□□□□ 0.13
BRCA2-204ENST00000530893 ZNF614Q8N883 585 aa15.88■□□□□ 0.13
BRCA2-204ENST00000530893 OR10H4Q8NGA5 316 aa15.88■□□□□ 0.13
BRCA2-204ENST00000530893 C11orf54Q9H0W9 315 aaPredicted RBP15.88■□□□□ 0.13
BRCA2-204ENST00000530893 TRAV27A0A087WT01 109 aa15.87■□□□□ 0.13
BRCA2-204ENST00000530893 SHISA3A0PJX4 238 aa15.87■□□□□ 0.13
BRCA2-204ENST00000530893 MEIOCA2RUB1 952 aa15.87■□□□□ 0.13
BRCA2-204ENST00000530893 SMIM30A4D0T7 59 aa15.87■□□□□ 0.13
BRCA2-204ENST00000530893 NPIPB9F8W1W9 429 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms