RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 SLX4IPQ5VYV7 408 aa18.77■□□□□ 0.6
SMCO4-203ENST00000526869 IGF2-ASQ6U949 168 aa18.77■□□□□ 0.6
SMCO4-203ENST00000526869 C16orf47Q6ZP98 133 aaPredicted RBP18.77■□□□□ 0.6
SMCO4-203ENST00000526869 DND1Q8IYX4 353 aaKnown RBP18.77■□□□□ 0.6
SMCO4-203ENST00000526869 CLDN22Q8N7P3 220 aa18.77■□□□□ 0.6
SMCO4-203ENST00000526869 GATSQ8NAP1 163 aa18.77■□□□□ 0.6
SMCO4-203ENST00000526869 GRHL3Q8TE85 626 aa18.77■□□□□ 0.6
SMCO4-203ENST00000526869 THAP3Q8WTV1 239 aaPredicted RBP18.77■□□□□ 0.6
SMCO4-203ENST00000526869 MRPS26Q9BYN8 205 aaKnown RBP18.77■□□□□ 0.6
SMCO4-203ENST00000526869 BLOC1S6Q9UL45 172 aa18.77■□□□□ 0.6
SMCO4-203ENST00000526869 MED31Q9Y3C7 131 aa18.77■□□□□ 0.6
SMCO4-203ENST00000526869 ADAM10O14672 748 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 ZNF354AO60765 605 aaPredicted RBP18.76■□□□□ 0.59
SMCO4-203ENST00000526869 ANGPTL1O95841 491 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 PNMTP11086 282 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 OTX2P32243 289 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 DLSTP36957 453 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 CDC42P60953 191 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 RPS18P62269 152 aaKnown RBP18.76■□□□□ 0.59
SMCO4-203ENST00000526869 GABREP78334 506 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 LSM11P83369 360 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMCO4-203ENST00000526869 ZNF117Q03924 483 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 CDK5R2Q13319 367 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 NTRK2Q16620 822 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 DESI1Q6ICB0 168 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 TMPRSS11FQ6ZWK6 438 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 MARCH3Q86UD3 253 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 RAB43Q86YS6 212 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 CCDC71Q8IV32 467 aaPredicted RBP18.76■□□□□ 0.59
SMCO4-203ENST00000526869 CADM2Q8N3J6 435 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 GALNT15Q8N3T1 639 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 TMCO5AQ8N6Q1 288 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 AMER2Q8N7J2 671 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 TSPAN14Q8NG11 270 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 FAM46AQ96IP4 442 aaKnown RBP18.76■□□□□ 0.59
SMCO4-203ENST00000526869 RASL10BQ96S79 203 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 GPA33Q99795 319 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 SLC19A3Q9BZV2 496 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 SLC25A19Q9HC21 320 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 ZNF160Q9HCG1 818 aa18.76■□□□□ 0.59
SMCO4-203ENST00000526869 TUBA8Q9NY65 449 aaPredicted RBP18.76■□□□□ 0.59
SMCO4-203ENST00000526869 TRIM64CA6NLI5 447 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 EIF4E1BA6NMX2 242 aaKnown RBP18.75■□□□□ 0.59
SMCO4-203ENST00000526869 HCRTR2O43614 444 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 PIP5K1CO60331 668 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 MPZL2O60487 215 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 OR2J2O76002 312 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 IGF2P01344 180 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 CCDC159P0C7I6 412 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 SUMO3P55854 103 aaPredicted RBP18.75■□□□□ 0.59
SMCO4-203ENST00000526869 FBXW4P57775 412 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 GABARAPL2P60520 117 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 TUBA4AP68366 448 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 CHAF1BQ13112 559 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 MEP1AQ16819 746 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 BROXQ5VW32 411 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 C12orf73Q69YU5 71 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 OPN5Q6U736 354 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 CBLN3Q6UW01 205 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 ASCL5Q7RTU5 278 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 CDK20Q8IZL9 346 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 OR5W2Q8NH69 310 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 FAM81AQ8TBF8 368 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 ADAMTS14Q8WXS8 1223 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 C3orf49Q96BT1 292 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 SPACA9Q96E40 222 aaPredicted RBP18.75■□□□□ 0.59
SMCO4-203ENST00000526869 ARSGQ96EG1 525 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 NODALQ96S42 347 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 ICAM5Q9UMF0 924 aa18.75■□□□□ 0.59
SMCO4-203ENST00000526869 YARS2Q9Y2Z4 477 aaKnown RBP18.75■□□□□ 0.59
SMCO4-203ENST00000526869 A0A087WUJ7 227 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 CDRT15L2A8MXV6 281 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 H3BN98 237 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 PGCP20142 388 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 ELK4P28324 431 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 RBMS1P29558 406 aaKnown RBP18.74■□□□□ 0.59
SMCO4-203ENST00000526869 HLCSP50747 726 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 P2RX1P51575 399 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 CSNK2BP67870 215 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 ZNF791Q3KP31 576 aaPredicted RBP18.74■□□□□ 0.59
SMCO4-203ENST00000526869 LAIR2Q6ISS4 152 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 TMEM81Q6P7N7 255 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 Q6ZPB1 254 aaPredicted RBP18.74■□□□□ 0.59
SMCO4-203ENST00000526869 MRGPREQ86SM8 312 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 ENTHD1Q8IYW4 607 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 RHOXF1Q8NHV9 184 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 IP6K3Q96PC2 410 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 SECISBP2Q96T21 854 aaKnown RBP18.74■□□□□ 0.59
SMCO4-203ENST00000526869 RTN4RQ9BZR6 473 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 IMPAD1Q9NX62 359 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 CNIH4Q9P003 139 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 FBXL4Q9UKA2 621 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 RNF6Q9Y252 685 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 PCDHGB6Q9Y5F9 930 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 SPEGQ15772 3267 aa18.74■□□□□ 0.59
SMCO4-203ENST00000526869 ZFHX2Q9C0A1 2572 aaPredicted RBP18.74■□□□□ 0.59
SMCO4-203ENST00000526869 A0A087WXM4 84 aa18.73■□□□□ 0.59
SMCO4-203ENST00000526869 SCO2O43819 266 aa18.73■□□□□ 0.59
SMCO4-203ENST00000526869 SOX14O95416 240 aa18.73■□□□□ 0.59
SMCO4-203ENST00000526869 NTN1O95631 604 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms