RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 AP3D1O14617 1153 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 ADAMDEC1O15204 470 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 EIF4E2O60573 245 aaKnown RBP8.53□□□□□ -1.04
PABPC1-222ENST00000523555 EDF1O60869 148 aaKnown RBP8.53□□□□□ -1.04
PABPC1-222ENST00000523555 DNAJA2O60884 412 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 SOX30O94993 753 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 TGDSO95455 350 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 CSTAP01040 98 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 CGAP01215 116 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 RPS4Y1P22090 263 aaKnown RBP8.53□□□□□ -1.04
PABPC1-222ENST00000523555 OPRM1P35372 400 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 RPS26P11Q5JNZ5 115 aaPredicted RBP8.53□□□□□ -1.04
PABPC1-222ENST00000523555 C6orf10Q5SRN2 563 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 ATAD3BQ5T9A4 648 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 AP1ARQ63HQ0 302 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 CGB2Q6NT52 195 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 BLOC1S3Q6QNY0 202 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 CHMP1BQ7LBR1 199 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 LILRA2Q8N149 483 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 TRIML2Q8N7C3 387 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 CNEP1R1Q8N9A8 125 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 OR5W2Q8NH69 310 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 OR2V1Q8NHB1 315 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 LINC01560Q8TB33 94 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 ROBO4Q8WZ75 1007 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 CNOT9Q92600 299 aaKnown RBP8.53□□□□□ -1.04
PABPC1-222ENST00000523555 DNAJA3Q96EY1 480 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 ITCHQ96J02 903 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 LAT2Q9GZY6 243 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 OPN3Q9H1Y3 402 aaPredicted RBP8.53□□□□□ -1.04
PABPC1-222ENST00000523555 ZNF385DQ9H6B1 395 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 TPT1P8Q9HAU6 139 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 MCCC2Q9HCC0 563 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 NPHS2Q9NP85 383 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 GALNT8Q9NY28 637 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 DCTN4Q9UJW0 460 aa8.53□□□□□ -1.04
PABPC1-222ENST00000523555 ANKHD1Q8IWZ3 2542 aaKnown RBP8.52□□□□□ -1.04
PABPC1-222ENST00000523555 OTOGQ6ZRI0 2925 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 IGHV3-15A0A0B4J1V0 119 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 A8MXE2 369 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 H3BNH8 94 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 ETV2O00321 342 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-222ENST00000523555 SMNDC1O75940 238 aaKnown RBP eCLIP8.52□□□□□ -1.058e-8■■■■■ 27.3
PABPC1-222ENST00000523555 ANP32DO95626 131 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 AGR2O95994 175 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 BCHEP06276 602 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 GUSBP08236 651 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 ZCCHC18P0CG32 403 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 SSTR2P30874 369 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 CCKARP32238 428 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 RYKP34925 604 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 CPOXP36551 454 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 CRATP43155 626 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 SUMO3P55854 103 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-222ENST00000523555 SESN3P58005 492 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 RPS3AP61247 264 aaKnown RBP8.52□□□□□ -1.05
PABPC1-222ENST00000523555 STX1BP61266 288 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 KCNJ10P78508 379 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 FAM27E3Q08E93 113 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 MYBPHQ13203 477 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 CBFBQ13951 182 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 SGCBQ16585 318 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 TMEM176BQ3YBM2 270 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-222ENST00000523555 AGKQ53H12 422 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 SLC25A53Q5H9E4 307 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 HBMQ6B0K9 141 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 ZNF474Q6S9Z5 364 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-222ENST00000523555 LRRC74BQ6ZQY2 392 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 MSANTD1Q6ZTZ1 278 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 ESPNLQ6ZVH7 1005 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 VRK2Q86Y07 508 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 TOR1AIP2Q8NFQ8 470 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 MAL2Q969L2 176 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 SPDL1Q96EA4 605 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 KLHL15Q96M94 604 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 ZFP3Q96NJ6 502 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 TRNT1Q96Q11 434 aaKnown RBP8.52□□□□□ -1.05
PABPC1-222ENST00000523555 ZNF559Q9BR84 538 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 RBM24Q9BX46 236 aaKnown RBP8.52□□□□□ -1.05
PABPC1-222ENST00000523555 IKZF5Q9H5V7 419 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 POLE3Q9NRF9 147 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 RLIMQ9NVW2 624 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 DNAJB12Q9NXW2 375 aaKnown RBP8.52□□□□□ -1.05
PABPC1-222ENST00000523555 KCNN3Q9UGI6 736 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 PACSIN3Q9UKS6 424 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 ZNF175Q9Y473 711 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 CHST2Q9Y4C5 530 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 GPC6Q9Y625 555 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-222ENST00000523555 AKAP6Q13023 2319 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 DSPPQ9NZW4 1301 aa8.52□□□□□ -1.05
PABPC1-222ENST00000523555 ANKRD17O75179 2603 aaKnown RBP8.51□□□□□ -1.05
PABPC1-222ENST00000523555 CELSR1Q9NYQ6 3014 aa8.51□□□□□ -1.05
PABPC1-222ENST00000523555 TRBV5-3A0A0A0MS03 114 aa8.51□□□□□ -1.05
PABPC1-222ENST00000523555 AGAP5A6NIR3 686 aa8.51□□□□□ -1.05
PABPC1-222ENST00000523555 CLIC1O00299 241 aa8.51□□□□□ -1.05
PABPC1-222ENST00000523555 KRT75O95678 551 aa8.51□□□□□ -1.05
PABPC1-222ENST00000523555 TFPTP0C1Z6 253 aa8.51□□□□□ -1.05
PABPC1-222ENST00000523555 NR2F1P10589 423 aa8.51□□□□□ -1.05
PABPC1-222ENST00000523555 ELK4P28324 431 aa8.51□□□□□ -1.05
PABPC1-222ENST00000523555 ADH6P28332 368 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms