RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 SGMS2Q8NHU3 365 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 CIDECQ96AQ7 238 aaPredicted RBP10.2□□□□□ -0.78
SDCBP-211ENST00000523441 QRSL1Q9H0R6 528 aaKnown RBP10.2□□□□□ -0.78
SDCBP-211ENST00000523441 FKRPQ9H9S5 495 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 BCO1Q9HAY6 547 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 LPAR2Q9HBW0 351 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 GRHL1Q9NZI5 618 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 TMCO1Q9UM00 188 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 NFU1Q9UMS0 254 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 MOKQ9UQ07 419 aa10.2□□□□□ -0.78
SDCBP-211ENST00000523441 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.2□□□□□ -0.783e-6■□□□□ 9.1
SDCBP-211ENST00000523441 LOC390937A0A1W2PQ73 354 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 NDUFS8O00217 210 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 KLF11O14901 512 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 RGS14O43566 566 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 PGM3O95394 542 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 PSMG1O95456 288 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 HSD17B3P37058 310 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 EIF1P41567 113 aaKnown RBP10.19□□□□□ -0.78
SDCBP-211ENST00000523441 PAFAH1B1P43034 410 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 SNRPD2P62316 118 aaKnown RBP10.19□□□□□ -0.78
SDCBP-211ENST00000523441 PHC1P78364 1004 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 DEFA6Q01524 100 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 ZNF763Q0D2J5 394 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 NAB1Q13506 487 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 RASA2Q15283 850 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 DUSP5Q16690 384 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 IMPG1Q17R60 797 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 VPS26BQ4G0F5 336 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 FBXW9Q5XUX1 488 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 GPRIN3Q6ZVF9 776 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 CYS1Q717R9 158 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 CCDC91Q7Z6B0 441 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 SLC16A11Q8NCK7 471 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 NUP43Q8NFH3 380 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 OR52E4Q8NGH9 312 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 ZMYND19Q96E35 227 aaPredicted RBP10.19□□□□□ -0.78
SDCBP-211ENST00000523441 ERP44Q9BS26 406 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 NARFLQ9H6Q4 476 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 UBQLN4Q9NRR5 601 aa10.19□□□□□ -0.78
SDCBP-211ENST00000523441 NOSIPQ9Y314 301 aaKnown RBP10.19□□□□□ -0.78
SDCBP-211ENST00000523441 CCDC189A1A4V9 331 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 CCDC188H7C350 402 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 PDPK1O15530 556 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 RAD51CO43502 376 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 AKAP10O43572 662 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 CYTIPO60759 359 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 NKX2-2O95096 273 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 H6PDO95479 791 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 ALOX5P09917 674 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 TFPIP10646 304 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 HSD3B1P14060 373 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 HSD3B2P26439 372 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 ELK4P28324 431 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 RAC3P60763 192 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 SLC25A3Q00325 362 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 TRIP10Q15642 601 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 GABRA6Q16445 453 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 MST1LQ2TV78 715 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 FAM71E1Q6IPT2 247 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 CDC73Q6P1J9 531 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 ZCCHC24Q8N2G6 241 aaKnown RBP10.18□□□□□ -0.78
SDCBP-211ENST00000523441 LINC01356Q8N9X3 169 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 CEP70Q8NHQ1 597 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 ZNF75CPQ92670 426 aaPredicted RBP10.18□□□□□ -0.78
SDCBP-211ENST00000523441 CDS1Q92903 461 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 APH1AQ96BI3 265 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 ZNF524Q96C55 264 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 GP6Q9HCN6 339 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 ASB6Q9NWX5 421 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 GRID1Q9ULK0 1009 aa10.18□□□□□ -0.78
SDCBP-211ENST00000523441 GOLGA8QA0A0J9YX86 632 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 SH3PXD2BA1X283 911 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 GOLGA8OA6NCC3 632 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 GOLGA8NF8WBI6 632 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 LYNX1G3V0Z9 82 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 GOLGA8RI6L899 631 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 SLITRK5O94991 958 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 LYNX1P0DP58 116 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 PRKCAP17252 672 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 ATP6V1C1P21283 382 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 P2RX1P51575 399 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 CHN2P52757 468 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 POU6F2P78424 691 aaPredicted RBP10.17□□□□□ -0.78
SDCBP-211ENST00000523441 LGALS3BPQ08380 585 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 C2orf54Q08AI8 447 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 SELENBP1Q13228 472 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 PDLIM3Q53GG5 364 aaPredicted RBP10.17□□□□□ -0.78
SDCBP-211ENST00000523441 UNC50Q53HI1 259 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 SHQ1Q6PI26 577 aaKnown RBP10.17□□□□□ -0.78
SDCBP-211ENST00000523441 MISPQ8IVT2 679 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 CDRT4Q8N9R6 151 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 OR6Y1Q8NGX8 325 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 CLHC1Q8NHS4 586 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 FBXO25Q8TCJ0 367 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 GPR119Q8TDV5 335 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 EGLN2Q96KS0 407 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 MRPL46Q9H2W6 279 aaKnown RBP10.17□□□□□ -0.78
SDCBP-211ENST00000523441 TAS2R16Q9NYV7 291 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 EMC3Q9P0I2 261 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms