RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 CCDC26Q8TAB7 109 aa6.02□□□□□ -1.45
LSM1-202ENST00000520286 NPRL2Q8WTW4 380 aa6.02□□□□□ -1.45
LSM1-202ENST00000520286 CTNNBL1Q8WYA6 563 aaPredicted RBP6.02□□□□□ -1.45
LSM1-202ENST00000520286 SH3GL3Q99963 347 aa6.02□□□□□ -1.45
LSM1-202ENST00000520286 TTYH2Q9BSA4 534 aa6.02□□□□□ -1.45
LSM1-202ENST00000520286 SYT11Q9BT88 431 aa6.02□□□□□ -1.45
LSM1-202ENST00000520286 CCDC28BQ9BUN5 200 aa6.02□□□□□ -1.45
LSM1-202ENST00000520286 VCX2Q9H322 139 aa6.02□□□□□ -1.45
LSM1-202ENST00000520286 GSTK1Q9Y2Q3 226 aa6.02□□□□□ -1.45
LSM1-202ENST00000520286 NRXN2Q9P2S2 1712 aa6.02□□□□□ -1.45
LSM1-202ENST00000520286 ADAMTS7Q9UKP4 1686 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 THSD7BQ9C0I4 1608 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 A0A1B0GUA9 196 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 A8MXK9 166 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 TM9SF1O15321 606 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 PPIHO43447 177 aaKnown RBP6.01□□□□□ -1.45
LSM1-202ENST00000520286 DCXO43602 365 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 PFKFB2O60825 505 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 STX11O75558 287 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 PALMO75781 387 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 SNX4O95219 450 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 IGKV3-20P01619 116 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 HCKP08631 526 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 CPN1P15169 458 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 NT5EP21589 574 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 EMDP50402 254 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 ZNF33BQ06732 778 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 HYAL1Q12794 435 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 C2CD6Q53TS8 623 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 TTC23Q5W5X9 447 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 LANCL3Q6ZV70 420 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 PRSS48Q7RTY5 328 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 ANKRD37Q7Z713 158 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 CCDC50Q8IVM0 306 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 ZNF679Q8IYX0 411 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 NECAB1Q8N987 351 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 SUMF1Q8NBK3 374 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 BEST4Q8NFU0 473 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 C18orf25Q96B23 403 aaPredicted RBP6.01□□□□□ -1.45
LSM1-202ENST00000520286 NTNG2Q96CW9 530 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 C11orf24Q96F05 449 aaPredicted RBP6.01□□□□□ -1.45
LSM1-202ENST00000520286 IWS1Q96ST2 819 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 CCT7Q99832 543 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 ATF6BQ99941 703 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 CHCHD5Q9BSY4 110 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 MCRIP2Q9BUT9 160 aaKnown RBP6.01□□□□□ -1.45
LSM1-202ENST00000520286 TRIM9Q9C026 710 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 VCPKMTQ9H867 229 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 LRRC40Q9H9A6 602 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 ABCC13Q9NSE7 274 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 MLXQ9UH92 298 aa6.01□□□□□ -1.45
LSM1-202ENST00000520286 PDE4DIPQ5VU43 2346 aa6□□□□□ -1.45
LSM1-202ENST00000520286 LTBP1Q14766 1721 aa6□□□□□ -1.45
LSM1-202ENST00000520286 SCN4AP35499 1836 aa6□□□□□ -1.45
LSM1-202ENST00000520286 CXCL11O14625 94 aa6□□□□□ -1.45
LSM1-202ENST00000520286 LINC01565O15544 149 aa6□□□□□ -1.45
LSM1-202ENST00000520286 OPN1LWP04000 364 aa6□□□□□ -1.45
LSM1-202ENST00000520286 IGFBP1P08833 259 aaPredicted RBP6□□□□□ -1.45
LSM1-202ENST00000520286 WNT2P09544 360 aa6□□□□□ -1.45
LSM1-202ENST00000520286 XRCC1P18887 633 aaPredicted RBP6□□□□□ -1.45
LSM1-202ENST00000520286 HNF1AP20823 631 aa6□□□□□ -1.45
LSM1-202ENST00000520286 LMO2P25791 158 aa6□□□□□ -1.45
LSM1-202ENST00000520286 RDXP35241 583 aaKnown RBP6□□□□□ -1.45
LSM1-202ENST00000520286 CCNHP51946 323 aaPredicted RBP6□□□□□ -1.45
LSM1-202ENST00000520286 RPS6P62753 249 aaKnown RBP6□□□□□ -1.45
LSM1-202ENST00000520286 ACY1Q03154 408 aa6□□□□□ -1.45
LSM1-202ENST00000520286 PCK2Q16822 640 aa6□□□□□ -1.45
LSM1-202ENST00000520286 CELF3Q5SZQ8 465 aaKnown RBP6□□□□□ -1.45
LSM1-202ENST00000520286 AP1ARQ63HQ0 302 aa6□□□□□ -1.45
LSM1-202ENST00000520286 REP15Q6BDI9 236 aa6□□□□□ -1.45
LSM1-202ENST00000520286 TTC19Q6DKK2 380 aaPredicted RBP6□□□□□ -1.45
LSM1-202ENST00000520286 PMF1Q6P1K2 205 aa6□□□□□ -1.45
LSM1-202ENST00000520286 SCYL2Q6P3W7 929 aa6□□□□□ -1.45
LSM1-202ENST00000520286 ZNF329Q86UD4 541 aa6□□□□□ -1.45
LSM1-202ENST00000520286 EIF1ADQ8N9N8 165 aaKnown RBP6□□□□□ -1.45
LSM1-202ENST00000520286 TRMT10AQ8TBZ6 339 aaKnown RBP6□□□□□ -1.45
LSM1-202ENST00000520286 CCDC12Q8WUD4 166 aaPredicted RBP6□□□□□ -1.45
LSM1-202ENST00000520286 MYLPFQ96A32 169 aa6□□□□□ -1.45
LSM1-202ENST00000520286 WBP1Q96G27 269 aa6□□□□□ -1.45
LSM1-202ENST00000520286 ZNF597Q96LX8 424 aa6□□□□□ -1.45
LSM1-202ENST00000520286 PSKH2Q96QS6 385 aa6□□□□□ -1.45
LSM1-202ENST00000520286 LLPHQ9BRT6 129 aaKnown RBP6□□□□□ -1.45
LSM1-202ENST00000520286 EDEM2Q9BV94 578 aa6□□□□□ -1.45
LSM1-202ENST00000520286 VPS33BQ9H267 617 aa6□□□□□ -1.45
LSM1-202ENST00000520286 TUBB1Q9H4B7 451 aa6□□□□□ -1.45
LSM1-202ENST00000520286 ELOVL3Q9HB03 270 aa6□□□□□ -1.45
LSM1-202ENST00000520286 BATF3Q9NR55 127 aa6□□□□□ -1.45
LSM1-202ENST00000520286 C6orf203Q9P0P8 240 aaPredicted RBP6□□□□□ -1.45
LSM1-202ENST00000520286 MUTYHQ9UIF7 546 aa6□□□□□ -1.45
LSM1-202ENST00000520286 MED23Q9ULK4 1368 aa6□□□□□ -1.45
LSM1-202ENST00000520286 MRC1P22897 1456 aa6□□□□□ -1.45
LSM1-202ENST00000520286 SNED1Q8TER0 1413 aa5.99□□□□□ -1.45
LSM1-202ENST00000520286 TRBV7-9A0A0J9YWB2 115 aa5.99□□□□□ -1.45
LSM1-202ENST00000520286 ESYT2A0FGR8 921 aa5.99□□□□□ -1.45
LSM1-202ENST00000520286 STX7O15400 261 aaKnown RBP5.99□□□□□ -1.45
LSM1-202ENST00000520286 JCHAINP01591 159 aa5.99□□□□□ -1.45
LSM1-202ENST00000520286 GSK3BP49841 420 aa5.99□□□□□ -1.45
LSM1-202ENST00000520286 LRRC74AQ0VAA2 488 aa5.99□□□□□ -1.45
LSM1-202ENST00000520286 ATXN7L3Q14CW9 347 aaPredicted RBP5.99□□□□□ -1.45
LSM1-202ENST00000520286 ZIC1Q15915 447 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms