RNA–Protein interactions for RNA: ENST00000518250.5

BRD9-215, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-215ENST00000518250 LDLRP01130 860 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 OPN1LWP04000 364 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 THBS1P07996 1170 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 PABPC4LP0CB38 370 aaKnown RBP12.96□□□□□ -0.33
BRD9-215ENST00000518250 RNF224P0DH78 156 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 ETS2P15036 469 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 ZNF708P17019 499 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 PRKCAP17252 672 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 EIF1P41567 113 aaKnown RBP12.96□□□□□ -0.33
BRD9-215ENST00000518250 SLC6A8P48029 635 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 GZMMP51124 257 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 CLDN18P56856 261 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 EEF1A1P68104 462 aaKnown RBP12.96□□□□□ -0.33
BRD9-215ENST00000518250 PLAURQ03405 335 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 RBBP4Q09028 425 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 TMEM44Q2T9K0 475 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 RTL6Q6ICC9 239 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 TMEM211Q6ICI0 200 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 MTFR2Q6P444 385 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 CLEC18BQ6UXF7 455 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 RPTNQ6XPR3 784 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 B3GNT6Q6ZMB0 384 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 NET1Q7Z628 596 aaPredicted RBP12.96□□□□□ -0.33
BRD9-215ENST00000518250 CLIP4Q8N3C7 705 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 GTPBP8Q8N3Z3 284 aaPredicted RBP12.96□□□□□ -0.33
BRD9-215ENST00000518250 MARVELD2Q8N4S9 558 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 MEIOBQ8N635 442 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 CLEC18CQ8NCF0 446 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 ZNF524Q96C55 264 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 TRIB1Q96RU8 372 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 DMRTA2Q96SC8 542 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 ZNF607Q96SK3 696 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 SPATA5L1Q9BVQ7 753 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 SPATA9Q9BWV2 254 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 ARMC7Q9H6L4 198 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 TMEM185BQ9H7F4 350 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 EXOSC3Q9NQT5 275 aaKnown RBP12.96□□□□□ -0.33
BRD9-215ENST00000518250 USP22Q9UPT9 525 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 GPC6Q9Y625 555 aaPredicted RBP12.96□□□□□ -0.33
BRD9-215ENST00000518250 AP4B1Q9Y6B7 739 aa12.96□□□□□ -0.33
BRD9-215ENST00000518250 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 C7orf72A4D263 438 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 CDHR4A6H8M9 788 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 CCT8L1PA6NM43 557 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 NDUFAB1O14561 156 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 AP3D1O14617 1153 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 GKN3PP0CG01 181 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 GP1BBP13224 206 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 CPN1P15169 458 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 IL11P20809 199 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 PCGF2P35227 344 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 PTGER4P35408 488 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 SUCLG1P53597 346 aaKnown RBP12.95□□□□□ -0.34
BRD9-215ENST00000518250 NUP107P57740 925 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 ADORA2A-AS1P86434 159 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 PMPCAQ10713 525 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 SF3B4Q15427 424 aaKnown RBP eCLIP12.95□□□□□ -0.34
BRD9-215ENST00000518250 VMACQ2NL98 169 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 ACSF3Q4G176 576 aaPredicted RBP12.95□□□□□ -0.34
BRD9-215ENST00000518250 RNF220Q5VTB9 566 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 POMZP3Q6PJE2 187 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 HACD2Q6Y1H2 254 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 CHMP1BQ7LBR1 199 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 ARPINQ7Z6K5 226 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 CALHM3Q86XJ0 350 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 ATP6V1C2Q8NEY4 427 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 OR10Q1Q8NGQ4 319 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 BCAS4Q8TDM0 211 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 PHF10Q8WUB8 498 aaKnown RBP12.95□□□□□ -0.34
BRD9-215ENST00000518250 TMEM234Q8WY98 164 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 HOPXQ9BPY8 73 aaPredicted RBP12.95□□□□□ -0.34
BRD9-215ENST00000518250 TUBA1CQ9BQE3 449 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 GPATCH1Q9BRR8 931 aaKnown RBP12.95□□□□□ -0.34
BRD9-215ENST00000518250 ARL8BQ9NVJ2 186 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 CMTM6Q9NX76 183 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 STOML1Q9UBI4 398 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 TAGLN3Q9UI15 199 aa12.95□□□□□ -0.34
BRD9-215ENST00000518250 CACNA1CQ13936 2221 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 INTS1Q8N201 2190 aaKnown RBP12.94□□□□□ -0.34
BRD9-215ENST00000518250 ICE1Q9Y2F5 2266 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 CFAP73A6NFT4 308 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 CLCA1A8K7I4 914 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 FAM220BPB1ANY3 271 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 KDM4EB2RXH2 506 aaPredicted RBP12.94□□□□□ -0.34
BRD9-215ENST00000518250 H0YC42 278 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 EIF1AYO14602 144 aaKnown RBP12.94□□□□□ -0.34
BRD9-215ENST00000518250 ADAM11O75078 769 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 SERPINB7O75635 380 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 OPN1SWP03999 348 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 HOXD4P09016 255 aaPredicted RBP12.94□□□□□ -0.34
BRD9-215ENST00000518250 GLI4P10075 376 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 UQCRBP14927 111 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 ME2P23368 584 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 PSMA4P25789 261 aaKnown RBP12.94□□□□□ -0.34
BRD9-215ENST00000518250 PRKAR1BP31321 381 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 SFTPDP35247 375 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 IDH2P48735 452 aaKnown RBP12.94□□□□□ -0.34
BRD9-215ENST00000518250 SLC7A2P52569 658 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 SMSP52788 366 aa12.94□□□□□ -0.34
BRD9-215ENST00000518250 TPD52P55327 224 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms