RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 MTX3Q5HYI7 312 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SEL1L2Q5TEA6 688 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 AP1ARQ63HQ0 302 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 WDR25Q64LD2 544 aaPredicted RBP2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SPECC1LQ69YQ0 1117 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 NADSYN1Q6IA69 706 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 PRR5LQ6MZQ0 368 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 GCNT7Q6ZNI0 430 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 Q6ZSR3 168 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 UTS2BQ765I0 119 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 COPS6Q7L5N1 327 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 APTXQ7Z2E3 356 aaKnown RBP2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 CCDC50Q8IVM0 306 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 NELFCDQ8IXH7 590 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SLC22A15Q8IZD6 547 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 CMTM8Q8IZV2 173 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 OR2L13Q8N349 312 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ZSCAN4Q8NAM6 433 aaPredicted RBP2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 FBXO36Q8NEA4 188 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 OR10H4Q8NGA5 316 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 OR10A7Q8NGE5 316 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 OR9Q2Q8NGE9 314 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 OR52H1Q8NGJ2 320 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 OR4A4PQ8NGN8 299 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 OR13C9Q8NGT0 318 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 OR2T11Q8NH01 316 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 LNX1Q8TBB1 728 aaPredicted RBP2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 PLPPR1Q8TBJ4 325 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SMAP2Q8WU79 429 aaPredicted RBP2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 HPSE2Q8WWQ2 592 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ANP32BQ92688 251 aaKnown RBP2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 UBE2E3Q969T4 207 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 NUS1Q96E22 293 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 DNAJA3Q96EY1 480 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 NAF1Q96HR8 494 aaKnown RBP2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 C8orf76Q96K31 380 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 LMLNQ96KR4 655 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ZNF354BQ96LW1 612 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ZNF641Q96N77 438 aaPredicted RBP2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 CNN2Q99439 309 aaKnown RBP2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SLC29A1Q99808 456 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 MAPKAP1Q9BPZ7 522 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SLC30A2Q9BRI3 323 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 TUBGCP2Q9BSJ2 902 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SLITRK2Q9H156 845 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ADAP2Q9NPF8 381 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ESM1Q9NQ30 184 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 MYEF2Q9P2K5 600 aaKnown RBP2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ZNHIT2Q9UHR6 403 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ENPP5Q9UJA9 477 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ICAM5Q9UMF0 924 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SCML2Q9UQR0 700 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 EIF3LQ9Y262 564 aaKnown RBP2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 EXOGQ9Y2C4 368 aaKnown RBP2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 OARD1Q9Y530 152 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 MMP24Q9Y5R2 645 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SELENOKQ9Y6D0 94 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 MROH7-TTC4A0A0A0MT08 1334 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 MYO3BQ8WXR4 1341 aa2.3□□□□□ -2.04
SCARNA11.3-201ENST00000517276 COL11A2P13942 1736 aaPredicted RBP2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 IGHV4-61A0A0C4DH41 118 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 GOLGA8QA0A0J9YX86 632 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 A0A1W2PR80 420 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 RAB19A4D1S5 217 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 NKX6-3A6NJ46 265 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 OR6C65A6NJZ3 312 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 TRPC5OSA6NMA1 111 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 PDZK1P1A8MUH7 402 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 F5H6K3 240 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 RAB29O14966 203 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 PPP1R2P9O14990 202 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 HCN1O60741 890 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 C1orf105O95561 183 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 GLUD1P00367 558 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 IGHV4-59P01825 116 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 PRSS2P07478 247 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 NGFRP08138 427 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 IGHV4-38-2P0DP08 117 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 PSG1P11464 419 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 NQO2P16083 231 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 H2AFXP16104 143 aaPredicted RBP2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 EIF2S2P20042 333 aaKnown RBP2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 IDSP22304 550 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 CCNOP22674 350 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 EDNRAP25101 427 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 CFHR2P36980 270 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ZFP36L2P47974 494 aaKnown RBP2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 GLUD2P49448 558 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 STK19P49842 368 aaPredicted RBP2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 IST1P53990 364 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 CRISP1P54107 249 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 DVL1P1P54792 670 aaPredicted RBP2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 LIM2P55344 173 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SKP1P63208 163 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 CTAG1AP78358 180 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 PHEXP78562 749 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 LCN2P80188 198 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 KLRC3Q07444 240 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SNTA1Q13424 505 aa2.29□□□□□ -2.04
SCARNA11.3-201ENST00000517276 MTF1Q14872 753 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms