RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 DPH5Q9H2P9 285 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 OCEL1Q9H607 264 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 TAS2R16Q9NYV7 291 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 GRHL1Q9NZI5 618 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 MALT1Q9UDY8 824 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 ICAM5Q9UMF0 924 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 ALPK2Q86TB3 2170 aa9.58□□□□□ -0.88
DDX41-216ENST00000513562 PKD1L1Q8TDX9 2849 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 IGKV3D-15A0A087WSY6 115 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 CCT8L1PA6NM43 557 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 A8MT66 165 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 ATP6V1G2-DDX39BF2Z307 99 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 OIP5O43482 229 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 NUDT14O95848 222 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 IGHV3-9P01782 118 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 TACSTD2P09758 323 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 ACP2P11117 423 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 PRKCAP17252 672 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 P2RX1P51575 399 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 CHN2P52757 468 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 CDH15P55291 814 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 MRPS25P82663 173 aaKnown RBP9.57□□□□□ -0.88
DDX41-216ENST00000513562 TOMM34Q15785 309 aaPredicted RBP9.57□□□□□ -0.88
DDX41-216ENST00000513562 TSNAXIP1Q2TAA8 658 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 SLC25A53Q5H9E4 307 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 ABLIM2Q6H8Q1 611 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 OR7E24Q6IFN5 339 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 RINLQ6ZS11 566 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 ZNF551Q7Z340 670 aaPredicted RBP9.57□□□□□ -0.88
DDX41-216ENST00000513562 MTERF4Q7Z6M4 381 aaKnown RBP9.57□□□□□ -0.88
DDX41-216ENST00000513562 UBE2J2Q8N2K1 259 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 ANKS4BQ8N8V4 417 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 WDR31Q8NA23 367 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 SLC16A11Q8NCK7 471 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 ATP6V1C2Q8NEY4 427 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 FBXO30Q8TB52 745 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 PHOSPHO1Q8TCT1 267 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 FAM216AQ8WUB2 273 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 GCDHQ92947 438 aaPredicted RBP9.57□□□□□ -0.88
DDX41-216ENST00000513562 APH1AQ96BI3 265 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 MRRFQ96E11 262 aaKnown RBP9.57□□□□□ -0.88
DDX41-216ENST00000513562 ERP44Q9BS26 406 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 C1QTNF6Q9BXI9 259 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 ASB6Q9NWX5 421 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 EMC3Q9P0I2 261 aa9.57□□□□□ -0.88
DDX41-216ENST00000513562 NPIPA5A0A0B4J1W7 369 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 NPIPA7E9PJI5 369 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 PDLIM1O00151 329 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 ETV2O00321 342 aaPredicted RBP9.56□□□□□ -0.88
DDX41-216ENST00000513562 LILRA1O75019 489 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 H6PDO95479 791 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 STAMBPO95630 424 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 HSPA4LO95757 839 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 ITGA5P08648 1049 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 SBK3P0C264 359 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 NPIPA8P0DM63 369 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 PCMT1P22061 227 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 GIFP27352 417 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 APEX1P27695 318 aaKnown RBP9.56□□□□□ -0.88
DDX41-216ENST00000513562 HMOX2P30519 316 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 SERPINB4P48594 390 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 DVL1P1P54792 670 aaPredicted RBP9.56□□□□□ -0.88
DDX41-216ENST00000513562 SLC25A3Q00325 362 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 GUCY2DQ02846 1103 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 BTKQ06187 659 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 HSPB3Q12988 150 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 MLC1Q15049 377 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 PDK3Q15120 406 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 UAP1Q16222 522 aaPredicted RBP9.56□□□□□ -0.88
DDX41-216ENST00000513562 DUSP5Q16690 384 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 EXOSC6Q5RKV6 272 aaKnown RBP9.56□□□□□ -0.88
DDX41-216ENST00000513562 CCNJQ5T5M9 372 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 C3orf33Q6P1S2 294 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 GPRIN3Q6ZVF9 776 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 IKBIPQ70UQ0 350 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 SLC46A3Q7Z3Q1 461 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 C17orf78Q8N4C9 275 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 TMEM151AQ8N4L1 468 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 CEP70Q8NHQ1 597 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 METTL6Q8TCB7 284 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 GPR119Q8TDV5 335 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 ZNF524Q96C55 264 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 MS4A4EQ96PG1 132 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 MRPL57Q9BQC6 102 aaKnown RBP9.56□□□□□ -0.88
DDX41-216ENST00000513562 MRPL46Q9H2W6 279 aaKnown RBP9.56□□□□□ -0.88
DDX41-216ENST00000513562 METTL17Q9H7H0 456 aaPredicted RBP9.56□□□□□ -0.88
DDX41-216ENST00000513562 ANKZF1Q9H8Y5 726 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 CARD8Q9Y2G2 431 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 WBP11Q9Y2W2 641 aaKnown RBP9.56□□□□□ -0.88
DDX41-216ENST00000513562 TRRAPQ9Y4A5 3859 aa9.56□□□□□ -0.88
DDX41-216ENST00000513562 A0A0G2JK05 382 aa9.55□□□□□ -0.88
DDX41-216ENST00000513562 SERTM1A2A2V5 107 aa9.55□□□□□ -0.88
DDX41-216ENST00000513562 FAM187AA6NFU0 413 aa9.55□□□□□ -0.88
DDX41-216ENST00000513562 SERINC4A6NH21 518 aa9.55□□□□□ -0.88
DDX41-216ENST00000513562 ZNF716A6NP11 495 aa9.55□□□□□ -0.88
DDX41-216ENST00000513562 GPC1P35052 558 aa9.55□□□□□ -0.88
DDX41-216ENST00000513562 PRKAG1P54619 331 aa9.55□□□□□ -0.88
DDX41-216ENST00000513562 FOXG1P55316 489 aaPredicted RBP9.55□□□□□ -0.88
DDX41-216ENST00000513562 LGALS3BPQ08380 585 aa9.55□□□□□ -0.88
DDX41-216ENST00000513562 KLHL26Q53HC5 615 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms