RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 OR2L13Q8N349 312 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 OR4F6Q8NGB9 312 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 OR4C3Q8NH37 302 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 FBXO17Q96EF6 278 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 MUS81Q96NY9 551 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 RBM4Q9BWF3 364 aaKnown RBP10.14□□□□□ -0.79
RNF4-216ENST00000511859 METTL17Q9H7H0 456 aaPredicted RBP10.14□□□□□ -0.79
RNF4-216ENST00000511859 CXorf36Q9H7Y0 433 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 DDX18Q9NVP1 670 aaKnown RBP10.14□□□□□ -0.79
RNF4-216ENST00000511859 CPSF2Q9P2I0 782 aaKnown RBP10.14□□□□□ -0.79
RNF4-216ENST00000511859 GRID1Q9ULK0 1009 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 PCDHB10Q9UN67 800 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 ZNF281Q9Y2X9 895 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 NPIPA5A0A0B4J1W7 369 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 GNG14A0A1W2PPG7 69 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 NPIPA7E9PJI5 369 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 CYTIPO60759 359 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 SNUPNO95149 360 aaKnown RBP10.14□□□□□ -0.79
RNF4-216ENST00000511859 KLHL2O95198 593 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 OXSR1O95747 527 aaPredicted RBP10.14□□□□□ -0.79
RNF4-216ENST00000511859 IGKV1D-16P01601 117 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 C2P06681 752 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 SNRPAP09012 282 aaKnown RBP10.14□□□□□ -0.79
RNF4-216ENST00000511859 NUDT17P0C025 328 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 NPIPA8P0DM63 369 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 HPGDP15428 266 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 TYK2P29597 1187 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 LCN1P31025 176 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 GSTM5P46439 218 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 LIMS1P48059 325 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 SERPINB8P50452 374 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 NCBP2P52298 156 aaKnown RBP eCLIP10.14□□□□□ -0.795e-11■■■□□ 14.7
RNF4-216ENST00000511859 CDH15P55291 814 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 SNRPD2P62316 118 aaKnown RBP10.14□□□□□ -0.79
RNF4-216ENST00000511859 CASP8Q14790 479 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 KRT71Q3SY84 523 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 FBXW9Q5XUX1 488 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 TMEM107Q6UX40 140 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 PEG10Q86TG7 708 aaKnown RBP10.14□□□□□ -0.79
RNF4-216ENST00000511859 B4GALNT2Q8NHY0 566 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 ZFP90Q8TF47 636 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 PHF21BQ96EK2 531 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 JMJD8Q96S16 334 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 VRK1Q99986 396 aaPredicted RBP10.14□□□□□ -0.79
RNF4-216ENST00000511859 VPS11Q9H270 941 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 CENPHQ9H3R5 247 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 ZNF180Q9UJW8 692 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 PCTPQ9UKL6 214 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 TMCO1Q9UM00 188 aa10.14□□□□□ -0.79
RNF4-216ENST00000511859 GPC6Q9Y625 555 aaPredicted RBP10.14□□□□□ -0.79
RNF4-216ENST00000511859 WNK2Q9Y3S1 2297 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 VWFP04275 2813 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 A0A1W2PPM1 405 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 GXYLT2A0PJZ3 443 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 CCT8L1PA6NM43 557 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 C9JVG2 144 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 STX16-NPEPL1H3BU86 382 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 STX16O14662 325 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 TMPRSS2O15393 492 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 PCDH7O60245 1069 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 LILRA1O75019 489 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 STAMBPO95630 424 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 OTCP00480 354 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 JUNP05412 331 aaKnown RBP10.13□□□□□ -0.79
RNF4-216ENST00000511859 APEX1P27695 318 aaKnown RBP10.13□□□□□ -0.79
RNF4-216ENST00000511859 VPS26BQ4G0F5 336 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 CEP85LQ5SZL2 805 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 RINLQ6ZS11 566 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 UBE2J2Q8N2K1 259 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 LRRC17Q8N6Y2 441 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 PTGR2Q8N8N7 351 aaPredicted RBP10.13□□□□□ -0.79
RNF4-216ENST00000511859 GPR151Q8TDV0 419 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 C16orf78Q8WTQ4 265 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 PIK3R3Q92569 461 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 ZNF75CPQ92670 426 aaPredicted RBP10.13□□□□□ -0.79
RNF4-216ENST00000511859 ZNF775Q96BV0 537 aaPredicted RBP10.13□□□□□ -0.79
RNF4-216ENST00000511859 ELP4Q96EB1 424 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 SH3YL1Q96HL8 342 aaPredicted RBP10.13□□□□□ -0.79
RNF4-216ENST00000511859 GPR78Q96P69 363 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 ZNF747Q9BV97 191 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 RAB1BQ9H0U4 201 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 COQ10BQ9H8M1 238 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 UBQLN4Q9NRR5 601 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 ASB6Q9NWX5 421 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 TAS2R16Q9NYV7 291 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 TAS2R7Q9NYW3 318 aa10.13□□□□□ -0.79
RNF4-216ENST00000511859 FBXO9Q9UK97 447 aaPredicted RBP10.13□□□□□ -0.79
RNF4-216ENST00000511859 A0A096LPK6 155 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 IGHV3-15A0A0B4J1V0 119 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 A0A1W2PQD3 144 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 B9A039 149 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 SCDO00767 359 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 IFI6P09912 130 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 DDCP20711 480 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 EDNRAP25101 427 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 SLC7A1P30825 629 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 HILS1P60008 231 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 RAE1P78406 368 aaKnown RBP10.12□□□□□ -0.79
RNF4-216ENST00000511859 MLC1Q15049 377 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 SPIN4Q56A73 249 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms