RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 NDUFA13Q9P0J0 144 aa13.94□□□□□ -0.18
SCLT1-209ENST00000511426 A0A087WUJ7 227 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 TEX51A0A1B0GUA7 166 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.93□□□□□ -0.18
SCLT1-209ENST00000511426 A0A1W2PNU3 283 aaPredicted RBP13.93□□□□□ -0.18
SCLT1-209ENST00000511426 SH3D21A4FU49 640 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 H3BN98 237 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 TNFSF15O95150 251 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 FBXO45P0C2W1 286 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 RPL5P46777 297 aaKnown RBP13.93□□□□□ -0.18
SCLT1-209ENST00000511426 P2RX1P51575 399 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 SMSP52788 366 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 C17orf67Q0P5P2 114 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 DNASE1L3Q13609 305 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 NTRK2Q16620 822 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 OPN5Q6U736 354 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 ENTHD1Q8IYW4 607 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 GALNT15Q8N3T1 639 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 OR5W2Q8NH69 310 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 RHOXF1Q8NHV9 184 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 HGDQ93099 445 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 TMEM43Q9BTV4 400 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 PLCXD1Q9NUJ7 323 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 FAM86C1Q9NVL1 165 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 FOXJ2Q9P0K8 574 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 NTNG1Q9Y2I2 539 aa13.93□□□□□ -0.18
SCLT1-209ENST00000511426 SLC1A7O00341 560 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 CDC40O60508 579 aaKnown RBP eCLIP13.92□□□□□ -0.18
SCLT1-209ENST00000511426 RAD1O60671 282 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 TP53P04637 393 aaPredicted RBP13.92□□□□□ -0.18
SCLT1-209ENST00000511426 ELK4P28324 431 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 MSX1P28360 303 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 SNRPGP62308 76 aaKnown RBP13.92□□□□□ -0.18
SCLT1-209ENST00000511426 CDK5Q00535 292 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 SNTA1Q13424 505 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 CBFBQ13951 182 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 MEP1AQ16819 746 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 C12orf73Q69YU5 71 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 SLC27A4Q6P1M0 643 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 CASP12Q6UXS9 341 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 APOOLQ6UXV4 268 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 PRICKLE2Q7Z3G6 844 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 MRGPREQ86SM8 312 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 RAB43Q86YS6 212 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 OR8J1Q8NGP2 316 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 IPCEF1Q8WWN9 437 aaPredicted RBP13.92□□□□□ -0.18
SCLT1-209ENST00000511426 Q96MT0 163 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 ICAM5Q9UMF0 924 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 YARS2Q9Y2Z4 477 aaKnown RBP13.92□□□□□ -0.18
SCLT1-209ENST00000511426 CDH10Q9Y6N8 788 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 OTOGLQ3ZCN5 2332 aa13.92□□□□□ -0.18
SCLT1-209ENST00000511426 A6NHS1 94 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 TP53I11O14683 189 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 TERTO14746 1132 aaKnown RBP13.91□□□□□ -0.18
SCLT1-209ENST00000511426 HCRTR2O43614 444 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 ADAM11O75078 769 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 RCBTB2O95199 551 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 SLC1A3P43003 542 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 GIPRP48546 466 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 IDH2P48735 452 aaKnown RBP13.91□□□□□ -0.18
SCLT1-209ENST00000511426 SLC9A3P48764 834 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 CHAF1BQ13112 559 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 CTU2Q2VPK5 515 aaKnown RBP13.91□□□□□ -0.18
SCLT1-209ENST00000511426 SLC25A30Q5SVS4 291 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 ZNF773Q6PK81 442 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 LYPD8Q6UX82 237 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 ZNF620Q6ZNG0 422 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 PPP1R32Q7Z5V6 425 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 CCDC71Q8IV32 467 aaPredicted RBP13.91□□□□□ -0.18
SCLT1-209ENST00000511426 CADM2Q8N3J6 435 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 TMCO5AQ8N6Q1 288 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 GRHL3Q8TE85 626 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 C3orf49Q96BT1 292 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 BPIFA2Q96DR5 249 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 SPACA9Q96E40 222 aaPredicted RBP13.91□□□□□ -0.18
SCLT1-209ENST00000511426 FAM46AQ96IP4 442 aaKnown RBP13.91□□□□□ -0.18
SCLT1-209ENST00000511426 FAM192AQ9GZU8 254 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 ADNPQ9H2P0 1102 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 ZBTB20Q9HC78 741 aaPredicted RBP13.91□□□□□ -0.18
SCLT1-209ENST00000511426 VCX3AQ9NNX9 186 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 MED17Q9NVC6 651 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 CARD8Q9Y2G2 431 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 IGLV3-32A0A0A0MS00 114 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 WWP2O00308 870 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 CDK2AP1O14519 115 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 TM4SF5O14894 197 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 GABRB1P18505 474 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 HTR3AP46098 478 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 DLX5P56178 289 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 ZNF117Q03924 483 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 TMEM44Q2T9K0 475 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 ANKDD1AQ495B1 522 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 TMEM201Q5SNT2 666 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 C5orf46Q6UWT4 87 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 WDR88Q6ZMY6 472 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 BRIX1Q8TDN6 353 aaKnown RBP13.91□□□□□ -0.18
SCLT1-209ENST00000511426 TMEM234Q8WY98 164 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 SLC38A2Q96QD8 506 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 RASL10BQ96S79 203 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 GPA33Q99795 319 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms