RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 DMRTA2Q96SC8 542 aa9.54□□□□□ -0.88
SKI-204ENST00000508416 NPAS1Q99742 590 aa9.54□□□□□ -0.88
SKI-204ENST00000508416 EXOSC3Q9NQT5 275 aaKnown RBP9.54□□□□□ -0.88
SKI-204ENST00000508416 RLIMQ9NVW2 624 aa9.54□□□□□ -0.88
SKI-204ENST00000508416 ZNF443Q9Y2A4 671 aaPredicted RBP9.54□□□□□ -0.88
SKI-204ENST00000508416 IFT52Q9Y366 437 aa9.54□□□□□ -0.88
SKI-204ENST00000508416 AP4B1Q9Y6B7 739 aa9.54□□□□□ -0.88
SKI-204ENST00000508416 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 CDHR4A6H8M9 788 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 WIPF3A6NGB9 483 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 H0Y3Z8 333 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 ZG16O60844 167 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 DNAJA2O60884 412 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 SERPINB7O75635 380 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 PABPC4LP0CB38 370 aaKnown RBP9.53□□□□□ -0.88
SKI-204ENST00000508416 RNF224P0DH78 156 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 GLI4P10075 376 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 ZNF708P17019 499 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 ZNF17P17021 662 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 PRKCAP17252 672 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 PGCP20142 388 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 PSMA4P25789 261 aaKnown RBP9.53□□□□□ -0.88
SKI-204ENST00000508416 AQP1P29972 269 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 SLC6A8P48029 635 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 GZMMP51124 257 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 SUCLG1P53597 346 aaKnown RBP9.53□□□□□ -0.88
SKI-204ENST00000508416 CLDN18P56856 261 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 SESN3P58005 492 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 EEF1A1P68104 462 aaKnown RBP9.53□□□□□ -0.88
SKI-204ENST00000508416 PLAURQ03405 335 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 PMPCAQ10713 525 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 FOXF1Q12946 379 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 ZSWIM7Q19AV6 140 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 LIN52Q52LA3 116 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 RPTNQ6XPR3 784 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 B3GNT6Q6ZMB0 384 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 CALHM3Q86XJ0 350 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 SLC30A8Q8IWU4 369 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 UBQLNLQ8IYU4 475 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 CLIP4Q8N3C7 705 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 MARVELD2Q8N4S9 558 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 FBXO27Q8NI29 283 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 ZNF563Q8TA94 476 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 ZPLD1Q8TCW7 415 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 PHF10Q8WUB8 498 aaKnown RBP9.53□□□□□ -0.88
SKI-204ENST00000508416 TMEM234Q8WY98 164 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 SMPDL3BQ92485 455 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 MRGPRX4Q96LA9 322 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 RNF145Q96MT1 663 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 ZNF607Q96SK3 696 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 HOPXQ9BPY8 73 aaPredicted RBP9.53□□□□□ -0.88
SKI-204ENST00000508416 GPATCH1Q9BRR8 931 aaKnown RBP9.53□□□□□ -0.88
SKI-204ENST00000508416 TTYH2Q9BSA4 534 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 SPATA5L1Q9BVQ7 753 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 SPATA9Q9BWV2 254 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 ARMC7Q9H6L4 198 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 DNAJB12Q9NXW2 375 aaKnown RBP9.53□□□□□ -0.88
SKI-204ENST00000508416 STOML1Q9UBI4 398 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 ANGPT4Q9Y264 503 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 FAM215AQ9Y5M1 114 aa9.53□□□□□ -0.88
SKI-204ENST00000508416 GPC6Q9Y625 555 aaPredicted RBP9.53□□□□□ -0.88
SKI-204ENST00000508416 CFAP73A6NFT4 308 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 CCT8L1PA6NM43 557 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 M0QX08 132 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 AP3D1O14617 1153 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 SEC14L5O43304 696 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 EFNA2O43921 213 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 TPST1O60507 370 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 ADAM11O75078 769 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 EPPINO95925 133 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 OPN1LWP04000 364 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 GKN3PP0CG01 181 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 GP1BBP13224 206 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 IL11P20809 199 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 ADH6P28332 368 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 PCGF2P35227 344 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 IDH2P48735 452 aaKnown RBP9.52□□□□□ -0.89
SKI-204ENST00000508416 NUDT2P50583 147 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 SMSP52788 366 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 CLDN15P56746 228 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 CLDN20P56880 219 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 NUP107P57740 925 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 EEFSECP57772 596 aaKnown RBP9.52□□□□□ -0.89
SKI-204ENST00000508416 RAC1P63000 192 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 ADORA2A-AS1P86434 159 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 PTPN13Q12923 2485 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 VMACQ2NL98 169 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 ACSF3Q4G176 576 aaPredicted RBP9.52□□□□□ -0.89
SKI-204ENST00000508416 SLC25A53Q5H9E4 307 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 RNF220Q5VTB9 566 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 HACD2Q6Y1H2 254 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 CHMP1BQ7LBR1 199 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 ARPINQ7Z6K5 226 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 MRGPRGQ86SM5 289 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 GRAMD2AQ8IUY3 354 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 SLC15A3Q8IY34 581 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 ZNF440Q8IYI8 595 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 MEIOBQ8N635 442 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 ATP6V1C2Q8NEY4 427 aa9.52□□□□□ -0.89
SKI-204ENST00000508416 OR10Q1Q8NGQ4 319 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms