RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 ME2P23368 584 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 SRD5A2P31213 254 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 CASRP41180 1078 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 ANXA11P50995 505 aaKnown RBP4.47□□□□□ -1.69
LMNB1-208ENST00000504788 SUMO3P55854 103 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-208ENST00000504788 VLDLRP98155 873 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 HOXC5Q00444 222 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 EGR4Q05215 589 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 CRYZQ08257 329 aaKnown RBP4.47□□□□□ -1.69
LMNB1-208ENST00000504788 C19orf57Q0VDD7 668 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 BNIP2Q12982 314 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 DNAL1Q4LDG9 190 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 CYBRD1Q53TN4 286 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF311Q5JNZ3 666 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 VASNQ6EMK4 673 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 ENPP6Q6UWR7 440 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 EIF3MQ7L2H7 374 aaKnown RBP4.47□□□□□ -1.69
LMNB1-208ENST00000504788 GGNQ86UU5 652 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 ARMC8Q8IUR7 673 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 MISPQ8IVT2 679 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 SLC30A8Q8IWU4 369 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 PEX5LQ8IYB4 626 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 FAM83FQ8NEG4 500 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-208ENST00000504788 PHOSPHO1Q8TCT1 267 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 DUS3LQ96G46 650 aaKnown RBP4.47□□□□□ -1.69
LMNB1-208ENST00000504788 ADGRG7Q96K78 797 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 DHRS1Q96LJ7 313 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF597Q96LX8 424 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 KCTD14Q9BQ13 255 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-208ENST00000504788 TBL1XR1Q9BZK7 514 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 AMBRA1Q9C0C7 1298 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.47□□□□□ -1.696e-9■■■□□ 15.9
LMNB1-208ENST00000504788 MMADHCQ9H3L0 296 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-208ENST00000504788 DSN1Q9H410 356 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 METTL7AQ9H8H3 244 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 MED17Q9NVC6 651 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 ADA2Q9NZK5 511 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 KLRF1Q9NZS2 232 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 MED11Q9P086 117 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 SPRR3Q9UBC9 169 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 ANAPC2Q9UJX6 822 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 A4GNTQ9UNA3 340 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 SLC35A3Q9Y2D2 325 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF835Q9Y2P0 537 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 RP1L1Q8IWN7 2480 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-208ENST00000504788 IGKV1D-42A0A075B6H8 117 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 A0A0B4J2E0 115 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 A0A1B0GX12 115 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 OR2M5A3KFT3 312 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 KDM4EB2RXH2 506 aaPredicted RBP4.46□□□□□ -1.69
LMNB1-208ENST00000504788 SHISA8B8ZZ34 492 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 M0R3H8 397 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 SCDO00767 359 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 PRKD3O94806 890 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 RASAL1O95294 804 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 SERPINA1P01009 418 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 CSTAP01040 98 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 MSX1P28360 303 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 SHC1P29353 583 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 KRT20P35900 424 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 OR1E2P47887 323 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 LIMS1P48059 325 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 LHX2P50458 406 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 MLLT10P55197 1068 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 DSCR4P56555 118 aaPredicted RBP4.46□□□□□ -1.69
LMNB1-208ENST00000504788 CLDN18P56856 261 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 SESN3P58005 492 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 TRAP1Q12931 704 aaKnown RBP4.46□□□□□ -1.69
LMNB1-208ENST00000504788 CCNIQ14094 377 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 GNA13Q14344 377 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 ZSCAN26Q16670 478 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 GLYR1Q49A26 553 aaPredicted RBP4.46□□□□□ -1.69
LMNB1-208ENST00000504788 LIN52Q52LA3 116 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 EIPR1Q53HC9 387 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 INTS11Q5TA45 600 aaKnown RBP4.46□□□□□ -1.69
LMNB1-208ENST00000504788 PIWIL3Q7Z3Z3 882 aaKnown RBP4.46□□□□□ -1.69
LMNB1-208ENST00000504788 PACS2Q86VP3 889 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 ADGRG3Q86Y34 549 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 SPPL2CQ8IUH8 684 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 ADGRG5Q8IZF4 528 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 GTPBP8Q8N3Z3 284 aaPredicted RBP4.46□□□□□ -1.69
LMNB1-208ENST00000504788 FAM109AQ8N4B1 249 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 CISD2Q8N5K1 135 aaKnown RBP4.46□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF527Q8NB42 609 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 PAPD5Q8NDF8 572 aaKnown RBP4.46□□□□□ -1.69
LMNB1-208ENST00000504788 OR1J4Q8NGS1 313 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 OR5W2Q8NH69 310 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 B4GALNT2Q8NHY0 566 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 FIG4Q92562 907 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 MIB2Q96AX9 1013 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 C3orf49Q96BT1 292 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 SH3YL1Q96HL8 342 aaPredicted RBP4.46□□□□□ -1.69
LMNB1-208ENST00000504788 C5orf34Q96MH7 638 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 GPR137Q96N19 417 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 ARHGAP9Q9BRR9 750 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 IL1RAPQ9NPH3 570 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 NDUFAF4Q9P032 175 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 SEC14L3Q9UDX4 400 aa4.46□□□□□ -1.69
LMNB1-208ENST00000504788 MAGEL2Q9UJ55 1249 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms