RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 KCTD20Q7Z5Y7 419 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 MEX3DQ86XN8 651 aaKnown RBP15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 SYNPRQ8TBG9 265 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 ZFP90Q8TF47 636 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 HHIPQ96QV1 700 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 SLA2Q9H6Q3 261 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 V9GY05 133 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 N4BP2Q86UW6 1770 aaPredicted RBP15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 TCRBV5S1A1TA0A578 114 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 CNOT4O95628 575 aaKnown RBP15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 OR8U9P0C7N5 309 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 KCNJ10P78508 379 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 MRPS21P82921 87 aaKnown RBP15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 TUBB3Q13509 450 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 ZNF322Q6U7Q0 402 aaPredicted RBP15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 RNF175Q8N4F7 328 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 L3MBTL4Q8NA19 623 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 OR5D14Q8NGL3 314 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 DUSP23Q9BVJ7 150 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 TRAV27A0A087WT01 109 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 F5H5K5 113 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 SRPX2O60687 465 aaPredicted RBP15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 AIFM1O95831 613 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 ARSBP15848 533 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 IDUAP35475 653 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 PSMB10P40306 273 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 TSPAN31Q12999 210 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 PTPRRQ15256 657 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 RNF113BQ8IZP6 322 aaKnown RBP15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 FAM174AQ8TBP5 190 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 SPIN2AQ99865 258 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 SPIN2BQ9BPZ2 258 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 CHRDQ9H2X0 955 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 HCFC2Q9Y5Z7 792 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 SCGB2A1O75556 95 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 GJA4P35212 333 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 GIPRP48546 466 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 CCNJQ5T5M9 372 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 TMEM53Q6P2H8 277 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 SGPP2Q8IWX5 399 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 CMTM1Q8IZ96 169 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 UHRF1Q96T88 793 aaPredicted RBP15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 SLC25A18Q9H1K4 315 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 HHLA2Q9UM44 414 aa15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 RPH3AQ9Y2J0 694 aaPredicted RBP15.48■□□□□ 0.07
PCDHA1-203ENST00000504120 A0A1B0GUL6 1792 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 MYH4Q9Y623 1939 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 IMPA1P29218 277 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 CD6P30203 668 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 CSNK1A1P48729 337 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 YPEL5P62699 121 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 MTFR2Q6P444 385 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 MRPL21Q7Z2W9 205 aaKnown RBP15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 MMP28Q9H239 520 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 KRBA1A5PL33 1030 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 TP53P04637 393 aaPredicted RBP15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 PTGER1P34995 402 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 NKX2-5P52952 324 aaPredicted RBP15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 PSPHP78330 225 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 DPY19L2P1Q6NXN4 242 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 SPRED1Q7Z699 444 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 RETREG3Q86VR2 466 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 LRRC56Q8IYG6 542 aaPredicted RBP15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 OR5B12Q96R08 314 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 OR10A5Q9H207 317 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 OR10A2Q9H208 303 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 RAD1O60671 282 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 CPNE6O95741 557 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 PVRP15151 417 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 C21orf33P30042 268 aaPredicted RBP15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 SNRPD2P62316 118 aaKnown RBP15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 MEF2DQ14814 521 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 SF3B4Q15427 424 aaKnown RBP eCLIP15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 UBE2UQ5VVX9 321 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 ZNF595Q8IYB9 648 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 BRIX1Q8TDN6 353 aaKnown RBP15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 TBC1D20Q96BZ9 403 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 MED17Q9NVC6 651 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 PLEKHJ1Q9NW61 149 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 TAAR2Q9P1P5 351 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 KNG1P01042 644 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 TPRA1Q86W33 373 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 NLGN4YQ8NFZ3 816 aaPredicted RBP15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 OR9A4Q8NGU2 314 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 ITFG2Q969R8 447 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 HCSTQ9UBK5 93 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 SLC22A7Q9Y694 548 aa15.47■□□□□ 0.07
PCDHA1-203ENST00000504120 CD38P28907 300 aa15.46■□□□□ 0.07
PCDHA1-203ENST00000504120 APLNRP35414 380 aa15.46■□□□□ 0.07
PCDHA1-203ENST00000504120 ZNF91Q05481 1191 aa15.46■□□□□ 0.07
PCDHA1-203ENST00000504120 LRRC28Q86X40 367 aaPredicted RBP15.46■□□□□ 0.07
PCDHA1-203ENST00000504120 GLYATL2Q8WU03 294 aa15.46■□□□□ 0.07
PCDHA1-203ENST00000504120 ASB17Q8WXJ9 295 aa15.46■□□□□ 0.07
PCDHA1-203ENST00000504120 PRRT1Q99946 306 aa15.46■□□□□ 0.07
PCDHA1-203ENST00000504120 PTRH2Q9Y3E5 179 aaKnown RBP15.46■□□□□ 0.07
PCDHA1-203ENST00000504120 PDE7AQ13946 482 aa15.46■□□□□ 0.07
PCDHA1-203ENST00000504120 FAM78AQ5JUQ0 283 aa15.46■□□□□ 0.07
PCDHA1-203ENST00000504120 LYSMD4Q5XG99 296 aa15.46■□□□□ 0.07
PCDHA1-203ENST00000504120 TCTN2Q96GX1 697 aa15.46■□□□□ 0.07
PCDHA1-203ENST00000504120 RADILQ96JH8 1075 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms