RNA–Protein interactions for RNA: ENST00000502250.5

ATXN3-206, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-206ENST00000502250 PDFQ9HBH1 243 aa4.89□□□□□ -1.63
ATXN3-206ENST00000502250 STARD5Q9NSY2 213 aa4.89□□□□□ -1.63
ATXN3-206ENST00000502250 NUDT4Q9NZJ9 180 aa4.89□□□□□ -1.63
ATXN3-206ENST00000502250 PAK5Q9P286 719 aa4.89□□□□□ -1.63
ATXN3-206ENST00000502250 COLEC10Q9Y6Z7 277 aa4.89□□□□□ -1.63
ATXN3-206ENST00000502250 MED13Q9UHV7 2174 aa4.89□□□□□ -1.63
ATXN3-206ENST00000502250 CCDC88CQ9P219 2028 aa4.89□□□□□ -1.63
ATXN3-206ENST00000502250 SHANK1Q9Y566 2161 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 PRRC2CQ9Y520 2896 aaKnown RBP4.88□□□□□ -1.63
ATXN3-206ENST00000502250 CXorf51AA0A1B0GTR3 108 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 TSPAN11A1L157 253 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 H3BMM5 538 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 NVLO15381 856 aaKnown RBP4.88□□□□□ -1.63
ATXN3-206ENST00000502250 SELENOFO60613 162 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 LSM8O95777 96 aaKnown RBP4.88□□□□□ -1.63
ATXN3-206ENST00000502250 ALPIP09923 528 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 LIPCP11150 499 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 CCL4P13236 92 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 CTSEP14091 401 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 UCHL3P15374 230 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 PDHA2P29803 388 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 SSTR1P30872 391 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 SDC4P31431 198 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 SOAT1P35610 550 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 ZFP36L1Q07352 338 aaKnown RBP4.88□□□□□ -1.63
ATXN3-206ENST00000502250 EIF3IQ13347 325 aaKnown RBP4.88□□□□□ -1.63
ATXN3-206ENST00000502250 SCARB2Q14108 478 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 ZNF770Q6IQ21 691 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-206ENST00000502250 WDR59Q6PJI9 974 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 DHRS11Q6UWP2 260 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 STRADAQ7RTN6 431 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 GALNTL5Q7Z4T8 443 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 GKN2Q86XP6 184 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 METTL4Q8N3J2 472 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 NKAIN3Q8N8D7 197 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 RTL3Q8N8U3 475 aaKnown RBP4.88□□□□□ -1.63
ATXN3-206ENST00000502250 Q8NBF4 154 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 PATE1Q8WXA2 126 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 MR1Q95460 341 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 NTAN1Q96AB6 310 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 NEDD4LQ96PU5 975 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 TUBGCP2Q9BSJ2 902 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 THUMPD3Q9BV44 507 aaKnown RBP4.88□□□□□ -1.63
ATXN3-206ENST00000502250 STRADBQ9C0K7 418 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 PARLQ9H300 379 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 RDH14Q9HBH5 336 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 SAMSN1Q9NSI8 373 aaKnown RBP4.88□□□□□ -1.63
ATXN3-206ENST00000502250 GPATCH2LQ9NWQ4 482 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 HPCAL4Q9UM19 191 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 MFHAS1Q9Y4C4 1052 aa4.88□□□□□ -1.63
ATXN3-206ENST00000502250 SPTBP11277 2137 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 CACNA1DQ01668 2161 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 hCG_38984A0A1B0GV85 526 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 IQCMA0A1B0GVH7 501 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 ZSCAN5CA6NGD5 496 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-206ENST00000502250 A8MX80 341 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 PES1O00541 588 aaKnown RBP4.87□□□□□ -1.63
ATXN3-206ENST00000502250 B4GAT1O43505 415 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 TLX2O43763 284 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-206ENST00000502250 NXPH4O95158 308 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 TNFP01375 233 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 RLN1P04808 185 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 ANKRD34CP0C6C1 535 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 AK4P27144 223 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-206ENST00000502250 KIAA1024LP59773 190 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 POLR2FP61218 127 aaKnown RBP4.87□□□□□ -1.63
ATXN3-206ENST00000502250 OGDHQ02218 1023 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 RAD51Q06609 339 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 TPD52L1Q16890 204 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-206ENST00000502250 C14orf28Q4W4Y0 310 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 NKAIN2Q5VXU1 208 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 SPECC1LQ69YQ0 1117 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 GDPGP1Q6ZNW5 385 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 FAM47EQ6ZV65 393 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 TAF8Q7Z7C8 310 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 MLKLQ8NB16 471 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 AQP11Q8NBQ7 271 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 MSANTD4Q8NCY6 345 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 OR56A4Q8NGH8 313 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 C11orf45Q8TAV5 145 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 CNRIP1Q96F85 164 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-206ENST00000502250 BSCL2Q96G97 398 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-206ENST00000502250 CELF6Q96J87 481 aaKnown RBP4.87□□□□□ -1.63
ATXN3-206ENST00000502250 SLC39A8Q9C0K1 460 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 LRRC19Q9H756 370 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 SUDS3Q9H7L9 328 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-206ENST00000502250 APPL1Q9UKG1 709 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 FBN3Q75N90 2809 aa4.87□□□□□ -1.63
ATXN3-206ENST00000502250 HIVEP3Q5T1R4 2406 aa4.86□□□□□ -1.63
ATXN3-206ENST00000502250 RP1L1Q8IWN7 2480 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-206ENST00000502250 CENPEQ02224 2701 aa4.86□□□□□ -1.63
ATXN3-206ENST00000502250 FER1L5A0AVI2 2057 aa4.86□□□□□ -1.63
ATXN3-206ENST00000502250 IGHV5-10-1A0A0J9YXX1 117 aa4.86□□□□□ -1.63
ATXN3-206ENST00000502250 A0A0U1RQS6 177 aa4.86□□□□□ -1.63
ATXN3-206ENST00000502250 TMEM110-MUSTN1A8MSY1 372 aa4.86□□□□□ -1.63
ATXN3-206ENST00000502250 E5RGE8 158 aa4.86□□□□□ -1.63
ATXN3-206ENST00000502250 G3V2L1 256 aa4.86□□□□□ -1.63
ATXN3-206ENST00000502250 TMX2-CTNND1H3BSU7 103 aa4.86□□□□□ -1.63
ATXN3-206ENST00000502250 CACNB4O00305 520 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-206ENST00000502250 KIF5CO60282 957 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms