RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 V9GYQ6 96 aa16.66■□□□□ 0.26
TSSC4-210ENST00000496468 ERICH4A6NGS2 130 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 NPIPA5E9PKD4 350 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 ADAM11O75078 769 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 CIB2O75838 187 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 PRG2P13727 222 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 TNFRSF1BP20333 461 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 MS4A2Q01362 244 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 FOXF1Q12946 379 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 IFI44LQ53G44 452 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 CMPK2Q5EBM0 449 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 FKBP9P1Q75LS8 142 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 YRDCQ86U90 279 aaKnown RBP16.65■□□□□ 0.26
TSSC4-210ENST00000496468 CARM1Q86X55 608 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 GPR119Q8TDV5 335 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 ZBTB8AQ96BR9 441 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 SLC6A15Q9H2J7 730 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 NPIPA1Q9UND3 350 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 POMPQ9Y244 141 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 RPH3AQ9Y2J0 694 aaPredicted RBP16.65■□□□□ 0.26
TSSC4-210ENST00000496468 SH3GLB1Q9Y371 365 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 LIPGQ9Y5X9 500 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 IGSF10Q6WRI0 2623 aa16.65■□□□□ 0.26
TSSC4-210ENST00000496468 TMEM229AB2RXF0 380 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 FAAHO00519 579 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 ACOT8O14734 319 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 ZNF17P17021 662 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 GCKP35557 465 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 ZNF136P52737 540 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 COPZ1P61923 177 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 HOXC5Q00444 222 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 SLC10A1Q14973 349 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 TOMM34Q15785 309 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-210ENST00000496468 WIPI1Q5MNZ9 446 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-210ENST00000496468 LACC1Q8IV20 430 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 FAM86B1Q8N7N1 296 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 CPT1CQ8TCG5 803 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 FAR1Q8WVX9 515 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 TMEM234Q8WY98 164 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 ST8SIA1Q92185 356 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 GPR137Q96N19 417 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 RAB3IPQ96QF0 476 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-210ENST00000496468 DEFB127Q9H1M4 99 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 LDAHQ9H6V9 325 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 EXO5Q9H790 373 aa16.64■□□□□ 0.25
TSSC4-210ENST00000496468 SPTA1P02549 2419 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 C7orf72A4D263 438 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 EIF4E1BA6NMX2 242 aaKnown RBP16.63■□□□□ 0.25
TSSC4-210ENST00000496468 PRKD3O94806 890 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 IFNW1P05000 195 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 GP1BBP13224 206 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 PRKCAP17252 672 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 MST1P26927 711 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 ACAA2P42765 397 aaKnown RBP16.63■□□□□ 0.25
TSSC4-210ENST00000496468 IDH2P48735 452 aaKnown RBP16.63■□□□□ 0.25
TSSC4-210ENST00000496468 KCNC4Q03721 635 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 C1orf146Q5VVC0 180 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 ZNF324BQ6AW86 544 aaPredicted RBP16.63■□□□□ 0.25
TSSC4-210ENST00000496468 ENPP6Q6UWR7 440 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 CADM2Q8N3J6 435 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 OR6T1Q8NGN1 323 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 UTP4Q969X6 686 aaKnown RBP16.63■□□□□ 0.25
TSSC4-210ENST00000496468 SFXN2Q96NB2 322 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 SLX1AQ9BQ83 275 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 ZNF559Q9BR84 538 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 PIGQQ9BRB3 760 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 ACKR4Q9NPB9 350 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 ASF1BQ9NVP2 202 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 MRPS18CQ9Y3D5 142 aaKnown RBP16.63■□□□□ 0.25
TSSC4-210ENST00000496468 HEATR5AQ86XA9 2040 aa16.63■□□□□ 0.25
TSSC4-210ENST00000496468 TRGV5A0A0B4J1U4 118 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 TCRBV5S2A0A599 114 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 SHISA8B8ZZ34 492 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 HCN1O60741 890 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 FMO6PO60774 539 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 IGHG3P01860 377 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 PRB1P04280 392 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 HTR2AP28223 471 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 EIF1P41567 113 aaKnown RBP16.62■□□□□ 0.25
TSSC4-210ENST00000496468 OR1E2P47887 323 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 TDGF1P3P51864 188 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 MLLT10P55197 1068 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 SESN3P58005 492 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 NPTX1Q15818 432 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 GLYR1Q49A26 553 aaPredicted RBP16.62■□□□□ 0.25
TSSC4-210ENST00000496468 WBP2NLQ6ICG8 309 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 DEF8Q6ZN54 512 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 PLEKHM3Q6ZWE6 761 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 GTPBP8Q8N3Z3 284 aaPredicted RBP16.62■□□□□ 0.25
TSSC4-210ENST00000496468 OR4D11Q8NGI4 311 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 POP5Q969H6 163 aaKnown RBP16.62■□□□□ 0.25
TSSC4-210ENST00000496468 PYURFQ96I23 114 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 MRGPRX4Q96LA9 322 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 WFDC6Q9BQY6 131 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 RPS6KB2Q9UBS0 482 aa16.62■□□□□ 0.25
TSSC4-210ENST00000496468 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.61■□□□□ 0.25
TSSC4-210ENST00000496468 AQP12BA6NM10 295 aa16.61■□□□□ 0.25
TSSC4-210ENST00000496468 ETV2O00321 342 aaPredicted RBP16.61■□□□□ 0.25
TSSC4-210ENST00000496468 ZIC3O60481 467 aa16.61■□□□□ 0.25
TSSC4-210ENST00000496468 ELK4P28324 431 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms