RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ENPP6Q6UWR7 440 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 PLXDC2Q6UX71 529 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 HACD2Q6Y1H2 254 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 MARVELD2Q8N4S9 558 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 SMPDL3BQ92485 455 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 CCDC120Q96HB5 630 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 SPATA9Q9BWV2 254 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 CACYBPQ9HB71 228 aaKnown RBP17.55■□□□□ 0.4
HDAC4-212ENST00000495497 EXOSC3Q9NQT5 275 aaKnown RBP17.55■□□□□ 0.4
HDAC4-212ENST00000495497 TAGLN3Q9UI15 199 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 ZNF232Q9UNY5 417 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 FAM215AQ9Y5M1 114 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 FASNP49327 2511 aaKnown RBP17.55■□□□□ 0.4
HDAC4-212ENST00000495497 GTF3C1Q12789 2109 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 FIGNL2A6NMB9 653 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 E9PLN8 166 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 NME4O00746 187 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 SEC14L5O43304 696 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 FRS3O43559 492 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 EFNA2O43921 213 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 TPST1O60507 370 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 DNAJA2O60884 412 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 OPN1SWP03999 348 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 THBS1P07996 1170 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 PEPDP12955 493 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 PRG2P13727 222 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 ZNF708P17019 499 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 ZNF17P17021 662 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 PGCP20142 388 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 PCGF2P35227 344 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 CLDN15P56746 228 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 CLDN20P56880 219 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 PCBP3P57721 371 aaKnown RBP17.54■□□□□ 0.4
HDAC4-212ENST00000495497 PSME3P61289 254 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 GLIPR1L2Q4G1C9 344 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 RNF220Q5VTB9 566 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 RPTNQ6XPR3 784 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 COMTD1Q86VU5 262 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 DMRTA2Q96SC8 542 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 ZNF607Q96SK3 696 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 HOPXQ9BPY8 73 aaPredicted RBP17.54■□□□□ 0.4
HDAC4-212ENST00000495497 VKORC1Q9BQB6 163 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 TUBA1CQ9BQE3 449 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 TMEM185BQ9H7F4 350 aa17.54■□□□□ 0.4
HDAC4-212ENST00000495497 HELZ2Q9BYK8 2649 aaKnown RBP17.54■□□□□ 0.4
HDAC4-212ENST00000495497 GCN1Q92616 2671 aaKnown RBP17.54■□□□□ 0.4
HDAC4-212ENST00000495497 C7orf72A4D263 438 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 H0Y3Z8 333 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 M0QX08 132 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 ZG16O60844 167 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 WDR1O75083 606 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 EPPINO95925 133 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 LDLRP01130 860 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 CPN1P15169 458 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 IDH2P48735 452 aaKnown RBP17.53■□□□□ 0.4
HDAC4-212ENST00000495497 SESN3P58005 492 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 ADORA2A-AS1P86434 159 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 HOXC5Q00444 222 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 DMTNQ08495 405 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 EPS8Q12929 822 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 C1orf185Q5T7R7 199 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 POMZP3Q6PJE2 187 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 KRT73Q86Y46 540 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 PM20D2Q8IYS1 436 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 SMYD1Q8NB12 490 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 ATP6V1C2Q8NEY4 427 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 ZNF563Q8TA94 476 aa17.53■□□□□ 0.4
HDAC4-212ENST00000495497 REXO5Q96IC2 774 aaKnown RBP17.53■□□□□ 0.4
HDAC4-212ENST00000495497 CFAP73A6NFT4 308 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 AHRRA9YTQ3 701 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 FAM220BPB1ANY3 271 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 LINC01387J3KSC0 135 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 MFN2O95140 757 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 NTN1O95631 604 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 GABRA1P14867 456 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 SHC1P29353 583 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 EIF1P41567 113 aaKnown RBP17.52■□□□□ 0.4
HDAC4-212ENST00000495497 ACAA2P42765 397 aaKnown RBP17.52■□□□□ 0.4
HDAC4-212ENST00000495497 NUP107P57740 925 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 SLC25A3Q00325 362 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 LIPEQ05469 1076 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 PMPCAQ10713 525 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 KRT72Q14CN4 511 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 ACSF3Q4G176 576 aaPredicted RBP17.52■□□□□ 0.4
HDAC4-212ENST00000495497 B3GNT6Q6ZMB0 384 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 ARPINQ7Z6K5 226 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 ARMC8Q8IUR7 673 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 GRAMD2AQ8IUY3 354 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 OR2T12Q8NG77 320 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 TRIB1Q96RU8 372 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 WFDC6Q9BQY6 131 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 TTYH2Q9BSA4 534 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 SPATA5L1Q9BVQ7 753 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 PACSIN3Q9UKS6 424 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 AP4B1Q9Y6B7 739 aa17.52■□□□□ 0.4
HDAC4-212ENST00000495497 ETV2O00321 342 aaPredicted RBP17.51■□□□□ 0.39
HDAC4-212ENST00000495497 SERPINB7O75635 380 aa17.51■□□□□ 0.39
HDAC4-212ENST00000495497 GLI4P10075 376 aa17.51■□□□□ 0.39
HDAC4-212ENST00000495497 GP1BBP13224 206 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms