RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 CYP7B1O75881 506 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 NUDT14O95848 222 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 VIMP08670 466 aaKnown RBP12.91□□□□□ -0.34
SCAP-213ENST00000494938 UBTFL6P0CB48 400 aaPredicted RBP12.91□□□□□ -0.34
SCAP-213ENST00000494938 BMP2P12643 396 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 RPS4Y1P22090 263 aaKnown RBP12.91□□□□□ -0.34
SCAP-213ENST00000494938 OPRM1P35372 400 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 MDH1P40925 334 aaKnown RBP12.91□□□□□ -0.34
SCAP-213ENST00000494938 SLC6A8P48029 635 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 DSTNP60981 165 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 SF3A3Q12874 501 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCAP-213ENST00000494938 CBFBQ13951 182 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 CHMP1BQ7LBR1 199 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 GRAMD2AQ8IUY3 354 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 MCEMP1Q8IX19 187 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 DMRTC2Q8IXT2 367 aaPredicted RBP12.91□□□□□ -0.34
SCAP-213ENST00000494938 LILRA2Q8N149 483 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 C10orf111Q8N326 155 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 FNDC9Q8TBE3 224 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 CNOT9Q92600 299 aaKnown RBP12.91□□□□□ -0.34
SCAP-213ENST00000494938 MRGPRX4Q96LA9 322 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 ZFP3Q96NJ6 502 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 TMEM120AQ9BXJ8 343 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 PINK1Q9BXM7 581 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 TRIM8Q9BZR9 551 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 TMEM185BQ9H7F4 350 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 VAPAQ9P0L0 249 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 STOML1Q9UBI4 398 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 TRIM33Q9UPN9 1127 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 SLC35A3Q9Y2D2 325 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 ZNF175Q9Y473 711 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 NAV2Q8IVL1 2488 aa12.91□□□□□ -0.34
SCAP-213ENST00000494938 A0A1W2PNV4 684 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 EIF1AYO14602 144 aaKnown RBP12.9□□□□□ -0.34
SCAP-213ENST00000494938 TNFSF13O75888 250 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 AQP8O94778 261 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 KIR2DL2P43627 348 aaPredicted RBP12.9□□□□□ -0.34
SCAP-213ENST00000494938 EIF1AXP47813 144 aaKnown RBP12.9□□□□□ -0.34
SCAP-213ENST00000494938 SESN3P58005 492 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 RPS3AP61247 264 aaKnown RBP12.9□□□□□ -0.34
SCAP-213ENST00000494938 PON3Q15166 354 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 FBXL19-AS1Q494R0 122 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 ESPNLQ6ZVH7 1005 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 RETREG3Q86VR2 466 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 GCNT2Q8N0V5 402 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 TMCO5AQ8N6Q1 288 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 OR10D3Q8NH80 312 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 OR2V1Q8NHB1 315 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 OSTF1Q92882 214 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 STARD4Q96DR4 205 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 ZNF317Q96PQ6 595 aaPredicted RBP12.9□□□□□ -0.34
SCAP-213ENST00000494938 SFXN3Q9BWM7 321 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 IKZF5Q9H5V7 419 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 RNF122Q9H9V4 155 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 EXOSC3Q9NQT5 275 aaKnown RBP12.9□□□□□ -0.34
SCAP-213ENST00000494938 ACER3Q9NUN7 267 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 P2RX2Q9UBL9 471 aa12.9□□□□□ -0.34
SCAP-213ENST00000494938 PCNX3Q9H6A9 2034 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 DSPPQ9NZW4 1301 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 TNFSF11O14788 317 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 CXCL13O43927 109 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 DBIP07108 87 aaKnown RBP12.89□□□□□ -0.35
SCAP-213ENST00000494938 TROVE2P10155 538 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCAP-213ENST00000494938 NID1P14543 1247 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 ELK4P28324 431 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 ASCL1P50553 236 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 CCR4P51679 360 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 ARFIP2P53365 341 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 CARD18P57730 90 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 EEF1A1P68104 462 aaKnown RBP12.89□□□□□ -0.35
SCAP-213ENST00000494938 HPCAP84074 193 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 GUSBP1Q15486 140 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 SGCBQ16585 318 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 TMEM176BQ3YBM2 270 aaPredicted RBP12.89□□□□□ -0.35
SCAP-213ENST00000494938 RUNDC3AQ59EK9 446 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 EEF1A1P5Q5VTE0 462 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 P4HA3Q7Z4N8 544 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 CMIPQ8IY22 773 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 DPP10Q8N608 796 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 TSPEARQ8WU66 669 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 MAL2Q969L2 176 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 TMEM19Q96HH6 336 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 KLHL15Q96M94 604 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 RSPO3Q9BXY4 272 aaPredicted RBP12.89□□□□□ -0.35
SCAP-213ENST00000494938 BCL2L10Q9HD36 194 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 A4GALTQ9NPC4 353 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 THUMPD1Q9NXG2 353 aaKnown RBP12.89□□□□□ -0.35
SCAP-213ENST00000494938 DNAJB12Q9NXW2 375 aaKnown RBP12.89□□□□□ -0.35
SCAP-213ENST00000494938 CHST2Q9Y4C5 530 aa12.89□□□□□ -0.35
SCAP-213ENST00000494938 PHF3Q92576 2039 aaKnown RBP12.89□□□□□ -0.35
SCAP-213ENST00000494938 A0A0G2JPF8 293 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 HNRNPCL2B2RXH8 293 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 HNRNPCL3B7ZW38 293 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 HNRNPCL1O60812 293 aaKnown RBP12.88□□□□□ -0.35
SCAP-213ENST00000494938 BCHEP06276 602 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 CRHP06850 196 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 HNRNPCL4P0DMR1 293 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 IL7RP16871 459 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 GPX2P18283 190 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 PGCP20142 388 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms