RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 PTPN13Q12923 2485 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 FXYD1O00168 92 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 MRASO14807 208 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 PGM3O95394 542 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 NTN1O95631 604 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 EIF1P41567 113 aaKnown RBP23.26■■□□□ 1.31
TTC3-223ENST00000492275 CDK6Q00534 326 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 MMEL1Q495T6 779 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 SLC25A53Q5H9E4 307 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 RIPPLY2Q5TAB7 128 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 NANOGP8Q6NSW7 305 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 PLXDC2Q6UX71 529 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 PIGWQ7Z7B1 504 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 GGNQ86UU5 652 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 LACC1Q8IV20 430 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 METTL25Q8N6Q8 603 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 POU5F2Q8N7G0 328 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 TNIP2Q8NFZ5 429 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 OR10Q1Q8NGQ4 319 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 LRRC58Q96CX6 371 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 SLC39A3Q9BRY0 314 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 MYLK2Q9H1R3 596 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 NANOGQ9H9S0 305 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 EXOSC3Q9NQT5 275 aaKnown RBP23.26■■□□□ 1.31
TTC3-223ENST00000492275 DNAJB12Q9NXW2 375 aaKnown RBP23.26■■□□□ 1.31
TTC3-223ENST00000492275 COQ3Q9NZJ6 369 aa23.26■■□□□ 1.31
TTC3-223ENST00000492275 PLEKHB1Q9UF11 243 aaPredicted RBP23.26■■□□□ 1.31
TTC3-223ENST00000492275 GPC6Q9Y625 555 aaPredicted RBP23.26■■□□□ 1.31
TTC3-223ENST00000492275 SPTAN1Q13813 2472 aaKnown RBP23.26■■□□□ 1.31
TTC3-223ENST00000492275 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.25■■□□□ 1.31
TTC3-223ENST00000492275 CLCA1A8K7I4 914 aa23.25■■□□□ 1.31
TTC3-223ENST00000492275 ETV2O00321 342 aaPredicted RBP23.25■■□□□ 1.31
TTC3-223ENST00000492275 ADH6P28332 368 aa23.25■■□□□ 1.31
TTC3-223ENST00000492275 TIMP3P35625 211 aa23.25■■□□□ 1.31
TTC3-223ENST00000492275 MRPL2Q5T653 305 aaKnown RBP23.25■■□□□ 1.31
TTC3-223ENST00000492275 MAMDC2Q7Z304 686 aaPredicted RBP23.25■■□□□ 1.31
TTC3-223ENST00000492275 PTOV1Q86YD1 416 aa23.25■■□□□ 1.31
TTC3-223ENST00000492275 TREML1Q86YW5 311 aa23.25■■□□□ 1.31
TTC3-223ENST00000492275 MEIOBQ8N635 442 aa23.25■■□□□ 1.31
TTC3-223ENST00000492275 RP9Q8TA86 221 aaKnown RBP23.25■■□□□ 1.31
TTC3-223ENST00000492275 BBS10Q8TAM1 723 aa23.25■■□□□ 1.31
TTC3-223ENST00000492275 SMPDL3BQ92485 455 aa23.25■■□□□ 1.31
TTC3-223ENST00000492275 UCN2Q96RP3 112 aa23.25■■□□□ 1.31
TTC3-223ENST00000492275 RSPO3Q9BXY4 272 aaPredicted RBP23.25■■□□□ 1.31
TTC3-223ENST00000492275 KAT8Q9H7Z6 458 aaKnown RBP23.25■■□□□ 1.31
TTC3-223ENST00000492275 RLIMQ9NVW2 624 aa23.25■■□□□ 1.31
TTC3-223ENST00000492275 CHST2Q9Y4C5 530 aa23.25■■□□□ 1.31
TTC3-223ENST00000492275 MBD3L4A6NDZ8 208 aaPredicted RBP23.24■■□□□ 1.31
TTC3-223ENST00000492275 MBD3L3A6NE82 208 aaPredicted RBP23.24■■□□□ 1.31
TTC3-223ENST00000492275 MBD3L5A6NJ08 208 aaPredicted RBP23.24■■□□□ 1.31
TTC3-223ENST00000492275 C5orf58C9J3I9 102 aa23.24■■□□□ 1.31
TTC3-223ENST00000492275 SEC14L5O43304 696 aa23.24■■□□□ 1.31
TTC3-223ENST00000492275 OPN1LWP04000 364 aa23.24■■□□□ 1.31
TTC3-223ENST00000492275 CEACAM8P31997 349 aaPredicted RBP23.24■■□□□ 1.31
TTC3-223ENST00000492275 RAC1P63000 192 aa23.24■■□□□ 1.31
TTC3-223ENST00000492275 EEF1A1P68104 462 aaKnown RBP23.24■■□□□ 1.31
TTC3-223ENST00000492275 ART3Q13508 389 aa23.24■■□□□ 1.31
TTC3-223ENST00000492275 ZNF836Q6ZNA1 936 aa23.24■■□□□ 1.31
TTC3-223ENST00000492275 MBD3L2Q8NHZ7 208 aaPredicted RBP23.24■■□□□ 1.31
TTC3-223ENST00000492275 MRGPRX4Q96LA9 322 aa23.24■■□□□ 1.31
TTC3-223ENST00000492275 CLCF1Q9UBD9 225 aa23.24■■□□□ 1.31
TTC3-223ENST00000492275 ZNF443Q9Y2A4 671 aaPredicted RBP23.24■■□□□ 1.31
TTC3-223ENST00000492275 INTS1Q8N201 2190 aaKnown RBP23.23■■□□□ 1.31
TTC3-223ENST00000492275 CDHR4A6H8M9 788 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 CLDN14O95500 239 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 NPPAP01160 153 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 THBS1P07996 1170 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 COX4I1P13073 169 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 PGCP20142 388 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 CHRNB4P30926 498 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 RYKP34925 604 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 GZMMP51124 257 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 SESN3P58005 492 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 SCARB2Q14108 478 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 LIN52Q52LA3 116 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 REEP3Q6NUK4 255 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 LIX1LQ8IVB5 337 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 CLIP4Q8N3C7 705 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 C9orf106Q8NAJ2 232 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 NAXEQ8NCW5 288 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 LILRB4Q8NHJ6 448 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 ASB5Q8WWX0 329 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 RCN3Q96D15 328 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 TMEM185BQ9H7F4 350 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 ACER3Q9NUN7 267 aa23.23■■□□□ 1.31
TTC3-223ENST00000492275 AP3D1O14617 1153 aa23.22■■□□□ 1.31
TTC3-223ENST00000492275 PABPC4LP0CB38 370 aaKnown RBP23.22■■□□□ 1.31
TTC3-223ENST00000492275 ETS2P15036 469 aa23.22■■□□□ 1.31
TTC3-223ENST00000492275 SHC1P29353 583 aa23.22■■□□□ 1.31
TTC3-223ENST00000492275 EEFSECP57772 596 aaKnown RBP23.22■■□□□ 1.31
TTC3-223ENST00000492275 CTU2Q2VPK5 515 aaKnown RBP23.22■■□□□ 1.31
TTC3-223ENST00000492275 RABL3Q5HYI8 236 aa23.22■■□□□ 1.31
TTC3-223ENST00000492275 RNF220Q5VTB9 566 aa23.22■■□□□ 1.31
TTC3-223ENST00000492275 NET1Q7Z628 596 aaPredicted RBP23.22■■□□□ 1.31
TTC3-223ENST00000492275 LILRA2Q8N149 483 aa23.22■■□□□ 1.31
TTC3-223ENST00000492275 PCYOX1LQ8NBM8 494 aa23.22■■□□□ 1.31
TTC3-223ENST00000492275 OR10A6Q8NH74 314 aa23.22■■□□□ 1.31
TTC3-223ENST00000492275 ST8SIA1Q92185 356 aa23.22■■□□□ 1.31
TTC3-223ENST00000492275 ADGRG7Q96K78 797 aa23.22■■□□□ 1.31
TTC3-223ENST00000492275 STOML1Q9UBI4 398 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms