RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 CFAP46Q8IYW2 2715 aa2.54□□□□□ -2
PHC3-213ENST00000491258 TRAV9-2A0A087WT02 112 aa2.54□□□□□ -2
PHC3-213ENST00000491258 TSPAN11A1L157 253 aa2.54□□□□□ -2
PHC3-213ENST00000491258 ZSCAN5CA6NGD5 496 aaPredicted RBP2.54□□□□□ -2
PHC3-213ENST00000491258 TMEM110-MUSTN1A8MSY1 372 aa2.54□□□□□ -2
PHC3-213ENST00000491258 LMO7DNF2Z398 122 aa2.54□□□□□ -2
PHC3-213ENST00000491258 PES1O00541 588 aaKnown RBP2.54□□□□□ -2
PHC3-213ENST00000491258 RRP8O43159 456 aaKnown RBP2.54□□□□□ -2
PHC3-213ENST00000491258 AQP9O43315 295 aa2.54□□□□□ -2
PHC3-213ENST00000491258 BUB1O43683 1085 aa2.54□□□□□ -2
PHC3-213ENST00000491258 NEBLO76041 1014 aa2.54□□□□□ -2
PHC3-213ENST00000491258 PRB1P04280 392 aa2.54□□□□□ -2
PHC3-213ENST00000491258 CALB1P05937 261 aa2.54□□□□□ -2
PHC3-213ENST00000491258 UGT2B4P06133 528 aa2.54□□□□□ -2
PHC3-213ENST00000491258 CSN3P07498 182 aa2.54□□□□□ -2
PHC3-213ENST00000491258 ALPPL2P10696 532 aa2.54□□□□□ -2
PHC3-213ENST00000491258 PCGF2P35227 344 aa2.54□□□□□ -2
PHC3-213ENST00000491258 NSFP46459 744 aaKnown RBP2.54□□□□□ -2
PHC3-213ENST00000491258 CSNK1DP48730 415 aa2.54□□□□□ -2
PHC3-213ENST00000491258 DUSP3P51452 185 aaPredicted RBP2.54□□□□□ -2
PHC3-213ENST00000491258 YBEYP58557 167 aaPredicted RBP2.54□□□□□ -2
PHC3-213ENST00000491258 ERVPABLB-1P60509 514 aa2.54□□□□□ -2
PHC3-213ENST00000491258 OGDHQ02218 1023 aa2.54□□□□□ -2
PHC3-213ENST00000491258 C1orf61Q13536 156 aa2.54□□□□□ -2
PHC3-213ENST00000491258 SYCP1Q15431 976 aa2.54□□□□□ -2
PHC3-213ENST00000491258 CDKN3Q16667 212 aa2.54□□□□□ -2
PHC3-213ENST00000491258 ISXQ2M1V0 245 aa2.54□□□□□ -2
PHC3-213ENST00000491258 WSCD2Q2TBF2 565 aa2.54□□□□□ -2
PHC3-213ENST00000491258 DEFB133Q30KQ1 61 aa2.54□□□□□ -2
PHC3-213ENST00000491258 PARP15Q460N3 678 aa2.54□□□□□ -2
PHC3-213ENST00000491258 TMEM52BQ4KMG9 183 aa2.54□□□□□ -2
PHC3-213ENST00000491258 SPANXN4Q5MJ08 99 aa2.54□□□□□ -2
PHC3-213ENST00000491258 MUC21Q5SSG8 566 aa2.54□□□□□ -2
PHC3-213ENST00000491258 MZT2BQ6NZ67 158 aa2.54□□□□□ -2
PHC3-213ENST00000491258 GUSBP11Q6P575 273 aa2.54□□□□□ -2
PHC3-213ENST00000491258 KDM7AQ6ZMT4 941 aa2.54□□□□□ -2
PHC3-213ENST00000491258 RBM43Q6ZSC3 357 aaKnown RBP2.54□□□□□ -2
PHC3-213ENST00000491258 STRADAQ7RTN6 431 aa2.54□□□□□ -2
PHC3-213ENST00000491258 APTXQ7Z2E3 356 aaKnown RBP2.54□□□□□ -2
PHC3-213ENST00000491258 CPEB2Q7Z5Q1 589 aaKnown RBP2.54□□□□□ -2
PHC3-213ENST00000491258 SLFN11Q7Z7L1 901 aa2.54□□□□□ -2
PHC3-213ENST00000491258 PARGQ86W56 976 aa2.54□□□□□ -2
PHC3-213ENST00000491258 MCOLN2Q8IZK6 566 aa2.54□□□□□ -2
PHC3-213ENST00000491258 UMODL1-AS1Q8N2C9 162 aa2.54□□□□□ -2
PHC3-213ENST00000491258 ZNF525Q8N782 197 aa2.54□□□□□ -2
PHC3-213ENST00000491258 DENND6BQ8NEG7 585 aa2.54□□□□□ -2
PHC3-213ENST00000491258 OR2AP1Q8NGE2 309 aa2.54□□□□□ -2
PHC3-213ENST00000491258 OR6K2Q8NGY2 324 aa2.54□□□□□ -2
PHC3-213ENST00000491258 LMX1AQ8TE12 382 aa2.54□□□□□ -2
PHC3-213ENST00000491258 FAM172AQ8WUF8 416 aa2.54□□□□□ -2
PHC3-213ENST00000491258 SNRNP27Q8WVK2 155 aaKnown RBP2.54□□□□□ -2
PHC3-213ENST00000491258 TBC1D31Q96DN5 1066 aa2.54□□□□□ -2
PHC3-213ENST00000491258 OTUB1Q96FW1 271 aaPredicted RBP2.54□□□□□ -2
PHC3-213ENST00000491258 LINC00615Q96LM1 132 aaPredicted RBP2.54□□□□□ -2
PHC3-213ENST00000491258 ZNF578Q96N58 590 aaPredicted RBP2.54□□□□□ -2
PHC3-213ENST00000491258 ERGIC2Q96RQ1 377 aa2.54□□□□□ -2
PHC3-213ENST00000491258 AGPAT1Q99943 283 aa2.54□□□□□ -2
PHC3-213ENST00000491258 EBF4Q9BQW3 602 aa2.54□□□□□ -2
PHC3-213ENST00000491258 C11orf70Q9BRQ4 267 aa2.54□□□□□ -2
PHC3-213ENST00000491258 CNPY3Q9BT09 278 aa2.54□□□□□ -2
PHC3-213ENST00000491258 TM6SF2Q9BZW4 377 aa2.54□□□□□ -2
PHC3-213ENST00000491258 ABCG4Q9H172 646 aa2.54□□□□□ -2
PHC3-213ENST00000491258 HSD3B7Q9H2F3 369 aa2.54□□□□□ -2
PHC3-213ENST00000491258 TCEAL2Q9H3H9 227 aaPredicted RBP2.54□□□□□ -2
PHC3-213ENST00000491258 ZDHHC6Q9H6R6 413 aa2.54□□□□□ -2
PHC3-213ENST00000491258 ASCL3Q9NQ33 180 aa2.54□□□□□ -2
PHC3-213ENST00000491258 DEPPQ9NTK1 212 aa2.54□□□□□ -2
PHC3-213ENST00000491258 SPASTQ9UBP0 616 aa2.54□□□□□ -2
PHC3-213ENST00000491258 HPCAL4Q9UM19 191 aa2.54□□□□□ -2
PHC3-213ENST00000491258 ITM2BQ9Y287 266 aa2.54□□□□□ -2
PHC3-213ENST00000491258 IGF2RP11717 2491 aa2.54□□□□□ -2
PHC3-213ENST00000491258 PLXNA3P51805 1871 aa2.54□□□□□ -2
PHC3-213ENST00000491258 GBF1Q92538 1859 aa2.54□□□□□ -2
PHC3-213ENST00000491258 ZZEF1O43149 2961 aa2.53□□□□□ -2
PHC3-213ENST00000491258 PIEZO2Q9H5I5 2752 aa2.53□□□□□ -2
PHC3-213ENST00000491258 MYH7BA7E2Y1 1941 aa2.53□□□□□ -2
PHC3-213ENST00000491258 NKX6-3A6NJ46 265 aa2.53□□□□□ -2
PHC3-213ENST00000491258 SLC33A1O00400 549 aaPredicted RBP2.53□□□□□ -2
PHC3-213ENST00000491258 CASC3O15234 703 aaKnown RBP2.53□□□□□ -2
PHC3-213ENST00000491258 CSO75390 466 aaKnown RBP2.53□□□□□ -2
PHC3-213ENST00000491258 ATP6AP2O75787 350 aa2.53□□□□□ -2
PHC3-213ENST00000491258 TM7SF2O76062 418 aa2.53□□□□□ -2
PHC3-213ENST00000491258 TPM2P07951 284 aa2.53□□□□□ -2
PHC3-213ENST00000491258 GZMAP12544 262 aa2.53□□□□□ -2
PHC3-213ENST00000491258 CD1EP15812 388 aa2.53□□□□□ -2
PHC3-213ENST00000491258 FASP25445 335 aa2.53□□□□□ -2
PHC3-213ENST00000491258 TRIM23P36406 574 aa2.53□□□□□ -2
PHC3-213ENST00000491258 HCAR3P49019 387 aa2.53□□□□□ -2
PHC3-213ENST00000491258 ASCL1P50553 236 aa2.53□□□□□ -2
PHC3-213ENST00000491258 AIF1P55008 147 aa2.53□□□□□ -2
PHC3-213ENST00000491258 CLDN15P56746 228 aa2.53□□□□□ -2
PHC3-213ENST00000491258 SRP54P61011 504 aaKnown RBP2.53□□□□□ -2
PHC3-213ENST00000491258 RHOAP61586 193 aa2.53□□□□□ -2
PHC3-213ENST00000491258 BTG1P62324 171 aa2.53□□□□□ -2
PHC3-213ENST00000491258 MYL5Q02045 173 aa2.53□□□□□ -2
PHC3-213ENST00000491258 UBXN1Q04323 297 aa2.53□□□□□ -2
PHC3-213ENST00000491258 RAD51Q06609 339 aa2.53□□□□□ -2
PHC3-213ENST00000491258 CCDC173Q0VFZ6 552 aa2.53□□□□□ -2
PHC3-213ENST00000491258 PTPRCAPQ14761 206 aa2.53□□□□□ -2
PHC3-213ENST00000491258 CDO1Q16878 200 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms