RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 UBQLN4Q9NRR5 601 aa6.12□□□□□ -1.43
HDLBP-243ENST00000488923 CUTCQ9NTM9 273 aa6.12□□□□□ -1.43
HDLBP-243ENST00000488923 NDUFB11Q9NX14 153 aa6.12□□□□□ -1.43
HDLBP-243ENST00000488923 SIDT1Q9NXL6 827 aaKnown RBP6.12□□□□□ -1.43
HDLBP-243ENST00000488923 CNIH4Q9P003 139 aa6.12□□□□□ -1.43
HDLBP-243ENST00000488923 HCN3Q9P1Z3 774 aa6.12□□□□□ -1.43
HDLBP-243ENST00000488923 HEATR5BQ9P2D3 2071 aa6.12□□□□□ -1.43
HDLBP-243ENST00000488923 ZNF223Q9UK11 482 aaPredicted RBP6.12□□□□□ -1.43
HDLBP-243ENST00000488923 CBLCQ9ULV8 474 aa6.12□□□□□ -1.43
HDLBP-243ENST00000488923 STUB1Q9UNE7 303 aa6.12□□□□□ -1.43
HDLBP-243ENST00000488923 SRPK3Q9UPE1 567 aa6.12□□□□□ -1.43
HDLBP-243ENST00000488923 EXOGQ9Y2C4 368 aaKnown RBP6.12□□□□□ -1.43
HDLBP-243ENST00000488923 LSM2Q9Y333 95 aaKnown RBP6.12□□□□□ -1.43
HDLBP-243ENST00000488923 PLXND1Q9Y4D7 1925 aa6.12□□□□□ -1.43
HDLBP-243ENST00000488923 UGT2A1Q9Y4X1 527 aa6.12□□□□□ -1.43
HDLBP-243ENST00000488923 MKI67P46013 3256 aaKnown RBP6.11□□□□□ -1.43
HDLBP-243ENST00000488923 IGHV1OR21-1A0A087WYE8 117 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 A0A0B4J2E0 115 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 IGHV5-51A0A0C4DH38 117 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 LOC100506127A0A0U1RQW1 187 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 C2orf92A0A1B0GVN3 265 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 A0A1B0GX12 115 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 GXYLT2A0PJZ3 443 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 SERINC4A6NH21 518 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 RIIAD1A6NNX1 92 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 LOC110117498-PIK3R3F6TDL0 507 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 NPIPB9F8W1W9 429 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 M0R129 80 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 PEX12O00623 359 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 DSCR3O14972 297 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 FRS3O43559 492 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 IDH3BO43837 385 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 DNAJB6O75190 326 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 CSO75390 466 aaKnown RBP6.11□□□□□ -1.43
HDLBP-243ENST00000488923 SNX4O95219 450 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 CSTAP01040 98 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 IL1AP01583 271 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 CYC1P08574 325 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 CT62P0C5K7 136 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 SAGP10523 405 aaPredicted RBP6.11□□□□□ -1.43
HDLBP-243ENST00000488923 PNMTP11086 282 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 IFI30P13284 250 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 HPGDP15428 266 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 ZNF3P17036 446 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 HK1P19367 917 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 FBLP22087 321 aaKnown RBP6.11□□□□□ -1.43
HDLBP-243ENST00000488923 NR4A1P22736 598 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 SOX18P35713 384 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 ATP6V1E1P36543 226 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 GPR4P46093 362 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 SLC6A8P48029 635 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 RORCP51449 518 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 LIMK1P53667 647 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 TAS2R43P59537 309 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 LSM3P62310 102 aaKnown RBP6.11□□□□□ -1.43
HDLBP-243ENST00000488923 ACY1Q03154 408 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 LGALS3BPQ08380 585 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 SQSTM1Q13501 440 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 TPBGQ13641 420 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 TRAM1Q15629 374 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 ELAVL1Q15717 326 aaKnown RBP6.11□□□□□ -1.43
HDLBP-243ENST00000488923 CCDC85BQ15834 202 aaPredicted RBP6.11□□□□□ -1.43
HDLBP-243ENST00000488923 INAQ16352 499 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 MAPK14Q16539 360 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 ZNF181Q2M3W8 571 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 DEFB133Q30KQ1 61 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 PLK5Q496M5 336 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 ALG10BQ5I7T1 473 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 SMARCD3Q6STE5 483 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 Q6ZNX1 250 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 RTL4Q6ZR62 310 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 CXXC5Q7LFL8 322 aaKnown RBP6.11□□□□□ -1.43
HDLBP-243ENST00000488923 OLIG3Q7RTU3 272 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 NUP54Q7Z3B4 507 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 WDR53Q7Z5U6 358 aaPredicted RBP6.11□□□□□ -1.43
HDLBP-243ENST00000488923 ATCAYQ86WG3 371 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 TMEFF1Q8IYR6 380 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 LNX2Q8N448 690 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 D2HGDHQ8N465 521 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 KLHL36Q8N4N3 616 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 IQCF1Q8N6M8 205 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 FRMD1Q8N878 549 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 ZNF614Q8N883 585 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 ZNF615Q8N8J6 731 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 LSM14AQ8ND56 463 aaKnown RBP6.11□□□□□ -1.43
HDLBP-243ENST00000488923 OR8D4Q8NGM9 314 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 OR14A16Q8NHC5 309 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 TMEM255BQ8WV15 326 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 AP3S1Q92572 193 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 UFD1Q92890 307 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 SLC41A2Q96JW4 573 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 CEP19Q96LK0 163 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 OPALINQ96PE5 141 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 OR5M11Q96RB7 305 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 GPA33Q99795 319 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 CHCHD6Q9BRQ6 235 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 MED18Q9BUE0 208 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 ZNF426Q9BUY5 554 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 CNPPD1Q9BV87 410 aa6.11□□□□□ -1.43
HDLBP-243ENST00000488923 FOXQ1Q9C009 403 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms