RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 CDK6Q00534 326 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 ART3Q13508 389 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 CYLC2Q14093 348 aaPredicted RBP12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 SF3B4Q15427 424 aaKnown RBP eCLIP12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 MMEL1Q495T6 779 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 LIN52Q52LA3 116 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 SLC25A53Q5H9E4 307 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 MRPL2Q5T653 305 aaKnown RBP12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 PRAMEF8Q5VWM4 474 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 PRAMEF7Q5VXH5 474 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 HIST2H2BCQ6DN03 193 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 ZNF836Q6ZNA1 936 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 CPLX4Q7Z7G2 160 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 MTDHQ86UE4 582 aaKnown RBP12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 PTOV1Q86YD1 416 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 PEX5LQ8IYB4 626 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 MEIOBQ8N635 442 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 C9orf106Q8NAJ2 232 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 NAXEQ8NCW5 288 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 OR52P1PQ8NH57 321 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 MBD3L2Q8NHZ7 208 aaPredicted RBP12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 BBS10Q8TAM1 723 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 UCN2Q96RP3 112 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 RSPO3Q9BXY4 272 aaPredicted RBP12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 MYLK2Q9H1R3 596 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 TMEM185BQ9H7F4 350 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 KAT8Q9H7Z6 458 aaKnown RBP12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 CALHM2Q9HA72 323 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 RLIMQ9NVW2 624 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 COQ3Q9NZJ6 369 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 ZNF443Q9Y2A4 671 aaPredicted RBP12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 CHST2Q9Y4C5 530 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 LRRK2Q5S007 2527 aa12.23□□□□□ -0.45
SOX2-OT-209ENST00000485035 CDHR4A6H8M9 788 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 C5orf58C9J3I9 102 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 AP3D1O14617 1153 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 PGCP20142 388 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 COL8A1P27658 744 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 ELK4P28324 431 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 ADH6P28332 368 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 CHRNB4P30926 498 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 CEACAM8P31997 349 aaPredicted RBP12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 RYKP34925 604 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 TIMP3P35625 211 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 RAC1P63000 192 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 EEF1A1P68104 462 aaKnown RBP12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 CTU2Q2VPK5 515 aaKnown RBP12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 RABL3Q5HYI8 236 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 RNF220Q5VTB9 566 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 NANOGP8Q6NSW7 305 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 REEP3Q6NUK4 255 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 TREML1Q86YW5 311 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 LIX1LQ8IVB5 337 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 CLIP4Q8N3C7 705 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 METTL25Q8N6Q8 603 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 CA5BP1Q8WTZ4 195 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 ASB5Q8WWX0 329 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 LRRC58Q96CX6 371 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 ZNF845Q96IR2 970 aaPredicted RBP12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 ADGRG7Q96K78 797 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 MRGPRX4Q96LA9 322 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 NANOGQ9H9S0 305 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 DOPEY1Q5JWR5 2465 aa12.22□□□□□ -0.45
SOX2-OT-209ENST00000485035 A0A0J9YW62 118 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 HSPB2A8KAH6 182 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 EIF1AYO14602 144 aaKnown RBP12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 TGM6O95932 706 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 THBS1P07996 1170 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 PABPC4LP0CB38 370 aaKnown RBP12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 COX4I1P13073 169 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 GP1BBP13224 206 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 ETS2P15036 469 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 HTR1EP28566 365 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 GRNP28799 593 aaKnown RBP12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 SFTPDP35247 375 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 GZMMP51124 257 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 DLX5P56178 289 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 SESN3P58005 492 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 SCARB2Q14108 478 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 HSPB2Q16082 182 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 CYP51A1Q16850 503 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 NET1Q7Z628 596 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 PIGWQ7Z7B1 504 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 LSRQ86X29 649 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 LILRB4Q8NHJ6 448 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 RP9Q8TA86 221 aaKnown RBP12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 ST8SIA1Q92185 356 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 FIG4Q92562 907 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 WNT2BQ93097 391 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 RCN3Q96D15 328 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 SPATA9Q9BWV2 254 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 PINK1Q9BXM7 581 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 UCK2Q9BZX2 261 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 ACER3Q9NUN7 267 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 IFT52Q9Y366 437 aa12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 KLF2Q9Y5W3 355 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-209ENST00000485035 NKX2-6A6NCS4 301 aa12.2□□□□□ -0.46
SOX2-OT-209ENST00000485035 CFAP73A6NFT4 308 aa12.2□□□□□ -0.46
SOX2-OT-209ENST00000485035 FAM90A27PA6NNH2 459 aa12.2□□□□□ -0.46
SOX2-OT-209ENST00000485035 PRSS44E7EML9 344 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms