RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 KCNJ10P78508 379 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 GNA13Q14344 377 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 TOMM34Q15785 309 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-225ENST00000483506 CTU2Q2VPK5 515 aaKnown RBP16.2■□□□□ 0.18
HDAC6-225ENST00000483506 FBXL19-AS1Q494R0 122 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 PRAMEF8Q5VWM4 474 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 PRAMEF7Q5VXH5 474 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 DLEU7Q6UYE1 221 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 GRAMD2AQ8IUY3 354 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 UBQLNLQ8IYU4 475 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 TMCO5AQ8N6Q1 288 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 ST8SIA1Q92185 356 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 QRSL1Q9H0R6 528 aaKnown RBP16.2■□□□□ 0.18
HDAC6-225ENST00000483506 A4GALTQ9NPC4 353 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 PAQR5Q9NXK6 330 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-225ENST00000483506 KLHL14Q9P2G3 628 aa16.2■□□□□ 0.18
HDAC6-225ENST00000483506 LEF1Q9UJU2 399 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-225ENST00000483506 SEC14L5O43304 696 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 EFNA2O43921 213 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 NUDT14O95848 222 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 BCHEP06276 602 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 DBIP07108 87 aaKnown RBP16.19■□□□□ 0.18
HDAC6-225ENST00000483506 UBTFL6P0CB48 400 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-225ENST00000483506 TMIGD3P0DMS9 266 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-225ENST00000483506 NID1P14543 1247 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 OPRM1P35372 400 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 QPRTQ15274 297 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 ESPNLQ6ZVH7 1005 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 CHMP1BQ7LBR1 199 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 FBXO27Q8NI29 283 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 WDR60Q8WVS4 1066 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 THUMPD3Q9BV44 507 aaKnown RBP16.19■□□□□ 0.18
HDAC6-225ENST00000483506 SFXN3Q9BWM7 321 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 BCL2L10Q9HD36 194 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 JKAMPQ9P055 326 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 CORO2BQ9UQ03 480 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 NDUFAF1Q9Y375 327 aa16.19■□□□□ 0.18
HDAC6-225ENST00000483506 NOTCH2Q04721 2471 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 SLC22A20A6NK97 555 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 CLDN24A6NM45 220 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 CRHP06850 196 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 SNRPB2P08579 225 aaKnown RBP16.18■□□□□ 0.18
HDAC6-225ENST00000483506 NUDT7P0C024 238 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 GPX2P18283 190 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 PGCP20142 388 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 IL11P20809 199 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 BMP5P22003 454 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 ME2P23368 584 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 CCR4P51679 360 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 EEF1A1P68104 462 aaKnown RBP16.18■□□□□ 0.18
HDAC6-225ENST00000483506 EEF1A1P5Q5VTE0 462 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 OR2A2Q6IF42 318 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 PLXDC2Q6UX71 529 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 RETREG3Q86VR2 466 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 PEX5LQ8IYB4 626 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 SMPDL3BQ92485 455 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 MARVELD3Q96A59 401 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 TMEM19Q96HH6 336 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 ZNF845Q96IR2 970 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-225ENST00000483506 PINK1Q9BXM7 581 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 IKZF5Q9H5V7 419 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 DNAJB12Q9NXW2 375 aaKnown RBP16.18■□□□□ 0.18
HDAC6-225ENST00000483506 PRDM4Q9UKN5 801 aa16.18■□□□□ 0.18
HDAC6-225ENST00000483506 ANKHD1Q8IWZ3 2542 aaKnown RBP16.17■□□□□ 0.18
HDAC6-225ENST00000483506 DCHS2Q6V1P9 2916 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 A0A0G2JPF8 293 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 TMEM247A6NEH6 219 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 HNRNPCL2B2RXH8 293 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 HNRNPCL3B7ZW38 293 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 FAAHO00519 579 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 EIF1AYO14602 144 aaKnown RBP16.17■□□□□ 0.18
HDAC6-225ENST00000483506 ANGPT2O15123 496 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 HNRNPCL1O60812 293 aaKnown RBP16.17■□□□□ 0.18
HDAC6-225ENST00000483506 THBS1P07996 1170 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 HNRNPCL4P0DMR1 293 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 FCGR2AP12318 317 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 COX6B1P14854 86 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 ADSLP30566 484 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-225ENST00000483506 SLC6A8P48029 635 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 ASCL1P50553 236 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 SESN3P58005 492 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 FOXF2Q12947 444 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 SELENBP1Q13228 472 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 PON3Q15166 354 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 LILRA2Q8N149 483 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 C10orf111Q8N326 155 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 OR10D3Q8NH80 312 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 OR2V1Q8NHB1 315 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 FNDC9Q8TBE3 224 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 C10orf82Q8WW14 230 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 TMEM234Q8WY98 164 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 FIG4Q92562 907 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 KLHL15Q96M94 604 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 CPPED1Q9BRF8 314 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-225ENST00000483506 RNF122Q9H9V4 155 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 SAR1AQ9NR31 198 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 ACER3Q9NUN7 267 aa16.17■□□□□ 0.18
HDAC6-225ENST00000483506 ABCA12Q86UK0 2595 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 A0A0J9YW62 118 aa16.16■□□□□ 0.18
HDAC6-225ENST00000483506 CDHR4A6H8M9 788 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms