RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 C11orf65Q8NCR3 313 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 HIPK4Q8NE63 616 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 OR10A6Q8NH74 314 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 FBXO27Q8NI29 283 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 MRGPRX4Q96LA9 322 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 RNF145Q96MT1 663 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 SPATA9Q9BWV2 254 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 CALHM2Q9HA72 323 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 CACYBPQ9HB71 228 aaKnown RBP16.07■□□□□ 0.16
SMIM4-202ENST00000476842 DNAJB12Q9NXW2 375 aaKnown RBP16.07■□□□□ 0.16
SMIM4-202ENST00000476842 ZNF443Q9Y2A4 671 aaPredicted RBP16.07■□□□□ 0.16
SMIM4-202ENST00000476842 GTF3C1Q12789 2109 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 HIVEP3Q5T1R4 2406 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 DNAJC13O75165 2243 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 CDHR4A6H8M9 788 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 H3BML4 177 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 AIM2O14862 343 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 DCTN3O75935 186 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 NTN1O95631 604 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 PABPC4LP0CB38 370 aaKnown RBP16.06■□□□□ 0.16
SMIM4-202ENST00000476842 DLX5P56178 289 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 CLDN15P56746 228 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 NUP107P57740 925 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 EEFSECP57772 596 aaKnown RBP16.06■□□□□ 0.16
SMIM4-202ENST00000476842 RAC1P63000 192 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 QPRTQ15274 297 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 ZNF311Q5JNZ3 666 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 NSUN5P2Q63ZY6 315 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 XKRXQ6PP77 449 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 ZNF836Q6ZNA1 936 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 MRGPRGQ86SM5 289 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 ADGRE4PQ86SQ3 457 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 CALHM3Q86XJ0 350 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 KRT73Q86Y46 540 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 SLC30A8Q8IWU4 369 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 ZZZ3Q8IYH5 903 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 ZNF440Q8IYI8 595 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 ZNF808Q8N4W9 903 aaPredicted RBP16.06■□□□□ 0.16
SMIM4-202ENST00000476842 MEIOBQ8N635 442 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 ITLN2Q8WWU7 325 aaPredicted RBP16.06■□□□□ 0.16
SMIM4-202ENST00000476842 TMEM234Q8WY98 164 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 ST8SIA1Q92185 356 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 RND1Q92730 232 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 LRRC37BQ96QE4 947 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 UCN2Q96RP3 112 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 ZNF607Q96SK3 696 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 HOPXQ9BPY8 73 aaPredicted RBP16.06■□□□□ 0.16
SMIM4-202ENST00000476842 ECSITQ9BQ95 431 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 TUBA1CQ9BQE3 449 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 GPATCH1Q9BRR8 931 aaKnown RBP16.06■□□□□ 0.16
SMIM4-202ENST00000476842 SPATA5L1Q9BVQ7 753 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 ARMC7Q9H6L4 198 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 RLIMQ9NVW2 624 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 CHST2Q9Y4C5 530 aa16.06■□□□□ 0.16
SMIM4-202ENST00000476842 USP9XQ93008 2570 aaPredicted RBP16.05■□□□□ 0.16
SMIM4-202ENST00000476842 CD8B2A6NJW9 211 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 H0Y3Z8 333 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 FAAHO00519 579 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 EFNA2O43921 213 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 ELK4P28324 431 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 SUCLG1P53597 346 aaKnown RBP16.05■□□□□ 0.16
SMIM4-202ENST00000476842 CLDN20P56880 219 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 SESN3P58005 492 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 FOXF1Q12946 379 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 GKAP1Q5VSY0 366 aaPredicted RBP16.05■□□□□ 0.16
SMIM4-202ENST00000476842 HACD2Q6Y1H2 254 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 SEM1Q6ZVN7 128 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 LACC1Q8IV20 430 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 CLIP4Q8N3C7 705 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 PSMG3-AS1Q96PY0 264 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 TRIB1Q96RU8 372 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 ACER3Q9NUN7 267 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 ANGPT4Q9Y264 503 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 AP3M1Q9Y2T2 418 aa16.05■□□□□ 0.16
SMIM4-202ENST00000476842 CFAP73A6NFT4 308 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 ADAM11O75078 769 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 SERPINB7O75635 380 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 PRKAR1BP31321 381 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 RYKP34925 604 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 TIMP3P35625 211 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 PCBP3P57721 371 aaKnown RBP16.04■□□□□ 0.16
SMIM4-202ENST00000476842 EPS8Q12929 822 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 ART3Q13508 389 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 VMACQ2NL98 169 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 RIPPLY2Q5TAB7 128 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 FAM91A1Q658Y4 838 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 ARPINQ7Z6K5 226 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 UBQLNLQ8IYU4 475 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 LILRA2Q8N149 483 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 ZNF563Q8TA94 476 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 SLC35B4Q969S0 331 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 ZNF583Q96ND8 569 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 COQ3Q9NZJ6 369 aa16.04■□□□□ 0.16
SMIM4-202ENST00000476842 MBD3L4A6NDZ8 208 aaPredicted RBP16.03■□□□□ 0.16
SMIM4-202ENST00000476842 MBD3L3A6NE82 208 aaPredicted RBP16.03■□□□□ 0.16
SMIM4-202ENST00000476842 MBD3L5A6NJ08 208 aaPredicted RBP16.03■□□□□ 0.16
SMIM4-202ENST00000476842 KDM4EB2RXH2 506 aaPredicted RBP16.03■□□□□ 0.16
SMIM4-202ENST00000476842 H0YC42 278 aa16.03■□□□□ 0.16
SMIM4-202ENST00000476842 ADAMDEC1O15204 470 aa16.03■□□□□ 0.16
SMIM4-202ENST00000476842 GCM2O75603 506 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms