RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 A6NIZ1 184 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 LILRB3O75022 631 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 FGF4P08620 206 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 GPX3P22352 226 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 RAP1BP61224 184 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 RAP1AP62834 184 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 OR1Q1Q15612 314 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 BCL2A1Q16548 175 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 PRAMEF20Q5VT98 475 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 FBXW12Q6X9E4 464 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 MOB3CQ70IA8 216 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 HTR3DQ70Z44 454 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 PIWIL3Q7Z3Z3 882 aaKnown RBP10.28□□□□□ -0.76
VAPB-204ENST00000475243 OR4F15Q8NGB8 312 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 GPR150Q8NGU9 434 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 SLC35A3Q9Y2D2 325 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 ENTPD2Q9Y5L3 495 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 BRWD1Q9NSI6 2320 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 ZNF780AO75290 641 aaPredicted RBP10.28□□□□□ -0.76
VAPB-204ENST00000475243 EDN1P05305 212 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 HLA-DMAP28067 261 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 VASPP50552 380 aaPredicted RBP10.28□□□□□ -0.76
VAPB-204ENST00000475243 PGM2L1Q6PCE3 622 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 PODNL1Q6PEZ8 512 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 ZNF704Q6ZNC4 412 aaPredicted RBP10.28□□□□□ -0.76
VAPB-204ENST00000475243 DEDD2Q8WXF8 326 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 ZNF300Q96RE9 604 aaPredicted RBP10.28□□□□□ -0.76
VAPB-204ENST00000475243 SLC29A1Q99808 456 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 CLSTN3Q9BQT9 956 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 SMIM3Q9BZL3 60 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 PDLIM7Q9NR12 457 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 PAHP00439 452 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 CA5AP35218 305 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 RGRP47804 291 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 CTBSQ01459 385 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 TDGQ13569 410 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 MBTPS1Q14703 1052 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 FAM83FQ8NEG4 500 aaPredicted RBP10.28□□□□□ -0.76
VAPB-204ENST00000475243 ZNF480Q8WV37 535 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 SLC30A3Q99726 388 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 HCFC2Q9Y5Z7 792 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 ACPPP15309 386 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 GNB3P16520 340 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 CX3CR1P49238 355 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 HBA1P69905 142 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 TRMT2BQ96GJ1 504 aaKnown RBP10.28□□□□□ -0.76
VAPB-204ENST00000475243 COG8Q96MW5 612 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 OR6C1Q96RD1 312 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 INIPQ9NRY2 104 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 F8W036 122 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 AP1G1O43747 822 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 CBX7O95931 251 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 IFNA4P05014 189 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 BLOC1S1P78537 153 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 PLAG1Q6DJT9 500 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 BORAQ6PGQ7 559 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 TRUB1Q8WWH5 349 aaKnown RBP10.28□□□□□ -0.76
VAPB-204ENST00000475243 MYADMQ96S97 322 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 SORT1Q99523 831 aa10.28□□□□□ -0.76
VAPB-204ENST00000475243 KDM3BQ7LBC6 1761 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 SC5DO75845 299 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 ALDOBP05062 364 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 SERPINA7P05543 415 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 CCDC32Q9BV29 185 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 DUSP23Q9BVJ7 150 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 EGLN3Q9H6Z9 239 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 LRP6O75581 1613 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 EIF3FO00303 357 aaPredicted RBP10.27□□□□□ -0.76
VAPB-204ENST00000475243 RAB4AP20338 218 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 RAB6AP20340 208 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 CRHBPP24387 322 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 ZNF140P52738 457 aaPredicted RBP10.27□□□□□ -0.76
VAPB-204ENST00000475243 EXOSC6Q5RKV6 272 aaKnown RBP10.27□□□□□ -0.76
VAPB-204ENST00000475243 GPR155Q7Z3F1 870 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 CHCHD4Q8N4Q1 142 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 BEST4Q8NFU0 473 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 TBC1D20Q96BZ9 403 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 CHFRQ96EP1 664 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 TMEM100Q9NV29 134 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 CBLCQ9ULV8 474 aa10.27□□□□□ -0.76
VAPB-204ENST00000475243 TSPAN15O95858 294 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 UGT2B7P16662 529 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 TNFRSF4P43489 277 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 SYPL1Q16563 259 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 COQ5Q5HYK3 327 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 OR52W1Q6IF63 320 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 FAM198BQ6UWH4 519 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 COMMD7Q86VX2 200 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 ADAMTS19Q8TE59 1207 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 SERTAD4Q9NUC0 356 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 TTLL8A6PVC2 850 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 FANCGO15287 622 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 GAAP10253 952 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 EVI2BP34910 448 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 FAM78AQ5JUQ0 283 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 CPZQ66K79 652 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 PPP1R3BQ86XI6 285 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 DCP2Q8IU60 420 aaKnown RBP10.27□□□□□ -0.77
VAPB-204ENST00000475243 ARFGAP1Q8N6T3 406 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 ARRDC3Q96B67 414 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms