RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 NUP43Q8NFH3 380 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 B4GALNT2Q8NHY0 566 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 GPR119Q8TDV5 335 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 MZB1Q8WU39 189 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 CDS1Q92903 461 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 MSI2Q96DH6 328 aaKnown RBP8.46□□□□□ -1.06
MCF2L-223ENST00000473345 L3HYPDHQ96EM0 354 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 DNAJA3Q96EY1 480 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 C1QTNF6Q9BXI9 259 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 BEX2Q9BXY8 128 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 QRSL1Q9H0R6 528 aaKnown RBP8.46□□□□□ -1.06
MCF2L-223ENST00000473345 TUBB1Q9H4B7 451 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 EML4Q9HC35 981 aaKnown RBP8.46□□□□□ -1.06
MCF2L-223ENST00000473345 MID1IP1Q9NPA3 183 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 CBLN4Q9NTU7 201 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 PAQR5Q9NXK6 330 aaPredicted RBP8.46□□□□□ -1.06
MCF2L-223ENST00000473345 BAIAP2L1Q9UHR4 511 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 GRID1Q9ULK0 1009 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 CARD8Q9Y2G2 431 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 SLC25A15Q9Y619 301 aa8.46□□□□□ -1.06
MCF2L-223ENST00000473345 MALRD1Q5VYJ5 2156 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 IGHV4-61A0A0C4DH41 118 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 OR5H1A6NKK0 313 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 HMGB1P1B2RPK0 211 aaPredicted RBP8.45□□□□□ -1.06
MCF2L-223ENST00000473345 RGS14O43566 566 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 AKAP10O43572 662 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 LMX1BO60663 402 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 RAD51DO75771 328 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 PRKD3O94806 890 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 SDC1P18827 310 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 ATP5F1P24539 256 aaPredicted RBP8.45□□□□□ -1.06
MCF2L-223ENST00000473345 CD40P25942 277 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 NTSP30990 170 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 CLK3P49761 638 aaKnown RBP8.45□□□□□ -1.06
MCF2L-223ENST00000473345 ZNF83P51522 516 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 ZNF41P51814 821 aaPredicted RBP8.45□□□□□ -1.06
MCF2L-223ENST00000473345 LCP2Q13094 533 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 PDE7AQ13946 482 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 RNPS1Q15287 305 aaKnown RBP8.45□□□□□ -1.06
MCF2L-223ENST00000473345 ZNHIT3Q15649 155 aaPredicted RBP8.45□□□□□ -1.06
MCF2L-223ENST00000473345 FAM120AOSQ5T036 256 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 CLEC6AQ6EIG7 209 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 CDRT4Q8N9R6 151 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 WDR31Q8NA23 367 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 ZNF527Q8NB42 609 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 OR52N5Q8NH56 324 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 ZFP90Q8TF47 636 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 CPNE4Q96A23 557 aaPredicted RBP8.45□□□□□ -1.06
MCF2L-223ENST00000473345 FAM120BQ96EK7 910 aaKnown RBP8.45□□□□□ -1.06
MCF2L-223ENST00000473345 FCRL1Q96LA6 429 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 SERHL2Q9H4I8 314 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 CHODLQ9H9P2 273 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 BARX1Q9HBU1 254 aaPredicted RBP8.45□□□□□ -1.06
MCF2L-223ENST00000473345 MIEF1Q9NQG6 463 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 PSMC3IPQ9P2W1 217 aaPredicted RBP8.45□□□□□ -1.06
MCF2L-223ENST00000473345 GIMAP2Q9UG22 337 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 ACTL7BQ9Y614 415 aa8.45□□□□□ -1.06
MCF2L-223ENST00000473345 A0A1W2PQD3 144 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 TLDC2A0PJX2 215 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 ZNF716A6NP11 495 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 H7C417 338 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 ETV2O00321 342 aaPredicted RBP8.44□□□□□ -1.06
MCF2L-223ENST00000473345 RGS16O15492 202 aaPredicted RBP8.44□□□□□ -1.06
MCF2L-223ENST00000473345 PDPK1O15530 556 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 KCNAB3O43448 404 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 CYTIPO60759 359 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 RSL1D1O76021 490 aaKnown RBP8.44□□□□□ -1.06
MCF2L-223ENST00000473345 SLITRK5O94991 958 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 ENO1P06733 434 aaKnown RBP8.44□□□□□ -1.06
MCF2L-223ENST00000473345 ITGA5P08648 1049 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 IFI6P09912 130 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 ELK4P28324 431 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 SERPINB9P50453 376 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 PSMD4P55036 377 aaKnown RBP8.44□□□□□ -1.06
MCF2L-223ENST00000473345 PKNOX1P55347 436 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 RASGEF1BQ0VAM2 473 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 NRF1Q16656 503 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 HSP90B2PQ58FF3 399 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 SLC25A53Q5H9E4 307 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 TIMM23BQ5SRD1 257 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 AGAP6Q5VW22 663 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 CYB5R2Q6BCY4 276 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 ABLIM2Q6H8Q1 611 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 CLEC2AQ6UVW9 174 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 TIFABQ6ZNK6 161 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 PHOSPHO1Q8TCT1 267 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 TSSK3Q96PN8 268 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 SORCS2Q96PQ0 1159 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 DHRS9Q9BPW9 319 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 SHARPINQ9H0F6 387 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 ALG2Q9H553 416 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 UBQLN4Q9NRR5 601 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 MRTO4Q9UKD2 239 aaKnown RBP8.44□□□□□ -1.06
MCF2L-223ENST00000473345 TRAF6Q9Y4K3 522 aa8.44□□□□□ -1.06
MCF2L-223ENST00000473345 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.44□□□□□ -1.061e-6■■□□□ 14.5
MCF2L-223ENST00000473345 PDLIM1O00151 329 aa8.43□□□□□ -1.06
MCF2L-223ENST00000473345 HAX1O00165 279 aa8.43□□□□□ -1.06
MCF2L-223ENST00000473345 C1QCP02747 245 aa8.43□□□□□ -1.06
MCF2L-223ENST00000473345 HMGN2P05204 90 aaKnown RBP8.43□□□□□ -1.06
MCF2L-223ENST00000473345 FESP07332 822 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms