RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 FADS6Q8N9I5 356 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 CCDC71LQ8N9Z2 235 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 OR52I1Q8NGK6 324 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 OR5L2Q8NGL0 311 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 SLC5A11Q8WWX8 675 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 DCUN1D4Q92564 292 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 NEU3Q9UQ49 428 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 THSD7BQ9C0I4 1608 aa3.73□□□□□ -1.81
CLK1-209ENST00000472679 USP27XA6NNY8 438 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 TMEM110-MUSTN1A8MSY1 372 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 KIF2AO00139 706 aaPredicted RBP3.72□□□□□ -1.81
CLK1-209ENST00000472679 OR1F1O43749 312 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 B3GALNT1O75752 331 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 TM7SF2O76062 418 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 UFL1O94874 794 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 CYP2B6P20813 491 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 CALB2P22676 271 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 HTR2AP28223 471 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 HOXD10P28358 340 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 NMT1P30419 496 aaKnown RBP3.72□□□□□ -1.81
CLK1-209ENST00000472679 MDH1P40925 334 aaKnown RBP3.72□□□□□ -1.81
CLK1-209ENST00000472679 PLA2G16P53816 162 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 CNTN2Q02246 1040 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 RABGAP1LQ5R372 815 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 AFTPHQ6ULP2 937 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 UNQ9370/PRO34162Q6UXP9 181 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 C16orf62Q7Z3J2 963 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 TMEM110Q86TL2 294 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 LRRC43Q8N309 656 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 OR2AP1Q8NGE2 309 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 PNPT1Q8TCS8 783 aaKnown RBP3.72□□□□□ -1.81
CLK1-209ENST00000472679 C12orf66Q96MD2 445 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 ZNF285Q96NJ3 590 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 DPH5Q9H2P9 285 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 POLE3Q9NRF9 147 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 CHRNA9Q9UGM1 479 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 NAP1L2Q9ULW6 460 aaPredicted RBP3.72□□□□□ -1.81
CLK1-209ENST00000472679 IFT52Q9Y366 437 aa3.72□□□□□ -1.81
CLK1-209ENST00000472679 FRMPD4Q14CM0 1322 aa3.71□□□□□ -1.81
CLK1-209ENST00000472679 ABCD4O14678 606 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 GNA14O95837 355 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 PGCP20142 388 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 NT5EP21589 574 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 HPDP32754 393 aaPredicted RBP3.71□□□□□ -1.82
CLK1-209ENST00000472679 SLC10A7Q0GE19 358 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 PJVKQ0ZLH3 352 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 USH1GQ495M9 461 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 CCDC92Q53HC0 331 aaPredicted RBP3.71□□□□□ -1.82
CLK1-209ENST00000472679 NCR3LG1Q68D85 454 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 WDR74Q6RFH5 385 aaPredicted RBP3.71□□□□□ -1.82
CLK1-209ENST00000472679 KIR3DL3Q8N743 410 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 DCAF4L2Q8NA75 395 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 OR9A1PQ8NGU1 263 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 OSTF1Q92882 214 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 GPA33Q99795 319 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 ARHGDIGQ99819 225 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 GNG12Q9UBI6 72 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 WARS2Q9UGM6 360 aaKnown RBP3.71□□□□□ -1.82
CLK1-209ENST00000472679 GTF3C1Q12789 2109 aa3.71□□□□□ -1.82
CLK1-209ENST00000472679 SF3B1O75533 1304 aaKnown RBP eCLIP3.7□□□□□ -1.82
CLK1-209ENST00000472679 IGHV2-70DA0A0C4DH43 119 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 A0A0G2JRQ6 117 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 PINLYPA6NC86 204 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 VSTM2BA6NLU5 285 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 K7EPI3 171 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 MSH4O15457 936 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 ZSCAN12O43309 604 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 SMPD2O60906 423 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 SLITRK3O94933 977 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 ASNSP08243 561 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 MDKP21741 143 aaPredicted RBP3.7□□□□□ -1.82
CLK1-209ENST00000472679 CCNE1P24864 410 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 CD1BP29016 333 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 UGT1A5P35504 534 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 HPCAL1P37235 193 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 APOC4P55056 127 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 DAZ2Q13117 558 aaKnown RBP3.7□□□□□ -1.82
CLK1-209ENST00000472679 CCDC57Q2TAC2 916 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 ZSCAN30Q86W11 494 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 NRMQ8IXM6 262 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 OR1E3Q8WZA6 343 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 RPL3LQ92901 407 aaKnown RBP3.7□□□□□ -1.82
CLK1-209ENST00000472679 ZNF799Q96GE5 643 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 KLHDC3Q9BQ90 382 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 MAGT1Q9H0U3 335 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 ZDHHC11Q9H8X9 412 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 LIN28AQ9H9Z2 209 aaKnown RBP3.7□□□□□ -1.82
CLK1-209ENST00000472679 DAZ3Q9NR90 486 aaKnown RBP3.7□□□□□ -1.82
CLK1-209ENST00000472679 DCDC2Q9UHG0 476 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 ALG6Q9Y672 507 aa3.7□□□□□ -1.82
CLK1-209ENST00000472679 GSAPA4D1B5 854 aa3.69□□□□□ -1.82
CLK1-209ENST00000472679 MAPK13O15264 365 aa3.69□□□□□ -1.82
CLK1-209ENST00000472679 HCN1O60741 890 aa3.69□□□□□ -1.82
CLK1-209ENST00000472679 NR2C1P13056 603 aa3.69□□□□□ -1.82
CLK1-209ENST00000472679 RNH1P13489 461 aaKnown RBP3.69□□□□□ -1.82
CLK1-209ENST00000472679 PRG2P13727 222 aa3.69□□□□□ -1.82
CLK1-209ENST00000472679 ZNF17P17021 662 aa3.69□□□□□ -1.82
CLK1-209ENST00000472679 POLR2FP61218 127 aaKnown RBP3.69□□□□□ -1.82
CLK1-209ENST00000472679 MXD4Q14582 209 aaPredicted RBP3.69□□□□□ -1.82
CLK1-209ENST00000472679 GGTA1PQ4G0N0 100 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms