RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 CLCF1Q9UBD9 225 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 LPAR3Q9UBY5 353 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 BCAP29Q9UHQ4 241 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 ZNF180Q9UJW8 692 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 MCTS1Q9ULC4 181 aaKnown RBP3.15□□□□□ -1.91
XRN1-209ENST00000472625 ZNF490Q9ULM2 529 aaPredicted RBP3.15□□□□□ -1.91
XRN1-209ENST00000472625 SNX6Q9UNH7 406 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 PROCRQ9UNN8 238 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 WBP11Q9Y2W2 641 aaKnown RBP3.15□□□□□ -1.91
XRN1-209ENST00000472625 MTO1Q9Y2Z2 717 aaKnown RBP3.15□□□□□ -1.91
XRN1-209ENST00000472625 ACOT9Q9Y305 439 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 SLC6A5Q9Y345 797 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 UTP11Q9Y3A2 253 aaKnown RBP3.15□□□□□ -1.91
XRN1-209ENST00000472625 OR10H1Q9Y4A9 318 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 ASB4Q9Y574 426 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 PSAT1Q9Y617 370 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 AP4B1Q9Y6B7 739 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 COX11Q9Y6N1 276 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 PRRC2AP48634 2157 aaKnown RBP3.15□□□□□ -1.91
XRN1-209ENST00000472625 INTS1Q8N201 2190 aaKnown RBP3.15□□□□□ -1.91
XRN1-209ENST00000472625 HEATR5BQ9P2D3 2071 aa3.15□□□□□ -1.91
XRN1-209ENST00000472625 PHF3Q92576 2039 aaKnown RBP3.14□□□□□ -1.91
XRN1-209ENST00000472625 CCDC88CQ9P219 2028 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 TRGV11A0A075B6L2 103 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 A0A087WZY1 265 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 CTAGE15A4D2H0 777 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 FAM159BA6NKW6 160 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 GJE1A6NN92 205 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 H3BML4 177 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 STX16-NPEPL1H3BU86 382 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 UBXN8O00124 270 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 KIF2AO00139 706 aaPredicted RBP3.14□□□□□ -1.91
XRN1-209ENST00000472625 SAP18O00422 153 aaKnown RBP3.14□□□□□ -1.91
XRN1-209ENST00000472625 STX16O14662 325 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 TAPBPO15533 448 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 PHGDHO43175 533 aaKnown RBP3.14□□□□□ -1.91
XRN1-209ENST00000472625 ZNF354AO60765 605 aaPredicted RBP3.14□□□□□ -1.91
XRN1-209ENST00000472625 ICOSLGO75144 302 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 CRLF1O75462 422 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 BANF1O75531 89 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 TNFSF13O75888 250 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 TUSC2O75896 110 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 SOX30O94993 753 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 KLHL2O95198 593 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 SYNGR4O95473 234 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 ACSL3O95573 720 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 LY6G6DO95868 133 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 SCGB1D2O95969 90 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 CHEK2O96017 543 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 KRT6AP02538 564 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 KRT6BP04259 564 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 RBP1P09455 135 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 CSF3P09919 207 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 CNTFP26441 200 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 DPP4P27487 766 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 ELK4P28324 431 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 NTSP30990 170 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 LCN1P31025 176 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 EVI2BP34910 448 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 MPIP34949 423 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 IDUAP35475 653 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 BSGP35613 385 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 EIF1P41567 113 aaKnown RBP3.14□□□□□ -1.91
XRN1-209ENST00000472625 KRT6CP48668 564 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 LHX2P50458 406 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 PNLIPRP2P54317 469 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 NAGLUP54802 743 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 ATP5J2P56134 94 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 CTBP2P56545 445 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 DSCR9P59020 149 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 MXRA7P84157 204 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 HMGCS1Q01581 520 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 SRYQ05066 204 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 CSTF3Q12996 717 aaKnown RBP3.14□□□□□ -1.91
XRN1-209ENST00000472625 GTF2H2Q13888 395 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 RNPS1Q15287 305 aaKnown RBP3.14□□□□□ -1.91
XRN1-209ENST00000472625 SGCBQ16585 318 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 DECR1Q16698 335 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 PFKFB4Q16877 469 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 ZIK1Q3SY52 487 aaPredicted RBP3.14□□□□□ -1.91
XRN1-209ENST00000472625 SPDYE7PQ495Y7 208 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 EIPR1Q53HC9 387 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 C1QTNF12Q5T7M4 302 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 C18orf63Q68DL7 685 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 ADNP2Q6IQ32 1131 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 HEPHL1Q6MZM0 1159 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 GTF2H2CQ6P1K8 395 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 ZNF704Q6ZNC4 412 aaPredicted RBP3.14□□□□□ -1.91
XRN1-209ENST00000472625 C3orf62Q6ZUJ4 267 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 PEG10Q86TG7 708 aaKnown RBP3.14□□□□□ -1.91
XRN1-209ENST00000472625 ISCA2Q86U28 154 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 YRDCQ86U90 279 aaKnown RBP3.14□□□□□ -1.91
XRN1-209ENST00000472625 CTAGE6Q86UF2 777 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 LCA5Q86VQ0 697 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 WDR75Q8IWA0 830 aaKnown RBP3.14□□□□□ -1.91
XRN1-209ENST00000472625 OR4N5Q8IXE1 308 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 KLHL7Q8IXQ5 586 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 FAM9CQ8IZT9 166 aa3.14□□□□□ -1.91
XRN1-209ENST00000472625 METTL25Q8N6Q8 603 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms