RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MGRN1O60291 552 aa17.46■□□□□ 0.39
PSPC1-203ENST00000471658 PRSS23O95084 383 aa17.46■□□□□ 0.39
PSPC1-203ENST00000471658 NTN1O95631 604 aa17.46■□□□□ 0.39
PSPC1-203ENST00000471658 BAG2O95816 211 aa17.46■□□□□ 0.39
PSPC1-203ENST00000471658 CST1P01037 141 aa17.46■□□□□ 0.39
PSPC1-203ENST00000471658 TCEA1P23193 301 aaKnown RBP17.46■□□□□ 0.39
PSPC1-203ENST00000471658 MST1P26927 711 aa17.46■□□□□ 0.39
PSPC1-203ENST00000471658 MEOX1P50221 254 aa17.46■□□□□ 0.39
PSPC1-203ENST00000471658 RCN1Q15293 331 aa17.46■□□□□ 0.39
PSPC1-203ENST00000471658 PLEKHM3Q6ZWE6 761 aa17.46■□□□□ 0.39
PSPC1-203ENST00000471658 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.46■□□□□ 0.39
PSPC1-203ENST00000471658 TM9SF4Q92544 642 aa17.46■□□□□ 0.39
PSPC1-203ENST00000471658 ZNF559Q9BR84 538 aa17.46■□□□□ 0.39
PSPC1-203ENST00000471658 NKX1-2Q9UD57 310 aaPredicted RBP17.46■□□□□ 0.39
PSPC1-203ENST00000471658 TESQ9UGI8 421 aaKnown RBP17.46■□□□□ 0.39
PSPC1-203ENST00000471658 TESMINQ9Y4I5 508 aa17.46■□□□□ 0.39
PSPC1-203ENST00000471658 DSPP15924 2871 aaKnown RBP17.45■□□□□ 0.38
PSPC1-203ENST00000471658 ANKUB1A6NFN9 424 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 HNRNPRO43390 633 aaKnown RBP17.45■□□□□ 0.38
PSPC1-203ENST00000471658 RHCEP18577 417 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 SLC6A8P48029 635 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 FOXK1P85037 733 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 CBFBQ13951 182 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 ZNF563Q8TA94 476 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 ADAMTS16Q8TE57 1224 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 ZNF597Q96LX8 424 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 PIP5K1AQ99755 562 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 ARHGAP9Q9BRR9 750 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 SEMA6AQ9H2E6 1030 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 EVA1AQ9H8M9 152 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 ZFP64Q9NPA5 681 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 VDAC3Q9Y277 283 aa17.45■□□□□ 0.38
PSPC1-203ENST00000471658 FAM32AQ9Y421 112 aaKnown RBP17.45■□□□□ 0.38
PSPC1-203ENST00000471658 CACNA1GO43497 2377 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 TRAV17A0A0B4J275 112 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 A0A1B0GWA3 101 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 SHISA8B8ZZ34 492 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 ITGA2P17301 1181 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 PGCP20142 388 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 MSX1P28360 303 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 IST1P53990 364 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 TAS2R41P59536 307 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 QPRTQ15274 297 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 ASB18Q6ZVZ8 466 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 ZNF605Q86T29 641 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 TMEM178AQ8NBL3 297 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 PRRC1Q96M27 445 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 YY1AP1Q9H869 796 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 TMEM27Q9HBJ8 222 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 MED17Q9NVC6 651 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 TAS2R10Q9NYW0 307 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 RIMS3Q9UJD0 308 aa17.44■□□□□ 0.38
PSPC1-203ENST00000471658 KLRC4-KLRK1H3BQV0 150 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 CLOCKO15516 846 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 FMO6PO60774 539 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 LYPD3O95274 346 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 ANPEPP15144 967 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 FASP25445 335 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 RRM2P31350 389 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 SESN3P58005 492 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 PMP22Q01453 160 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 SPIBQ01892 262 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 OR2T5Q6IEZ7 315 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 GDF7Q7Z4P5 450 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 CYP4Z1Q86W10 505 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 LSMEM1Q8N8F7 131 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 EXD3Q8N9H8 876 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 OR2T29Q8NH02 315 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 OR52J3Q8NH60 311 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 C1GALT1C1Q96EU7 318 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 SLC41A3Q96GZ6 507 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 TRIM2Q9C040 744 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 NMNAT1Q9HAN9 279 aaPredicted RBP17.43■□□□□ 0.38
PSPC1-203ENST00000471658 NTN4Q9HB63 628 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 ACAD8Q9UKU7 415 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 PCDHGB7Q9Y5F8 929 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 ACACBO00763 2458 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 ATMQ13315 3056 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 CBR3O75828 277 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 PTNP21246 168 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 CDH12P55289 794 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 SUMO3P55854 103 aaPredicted RBP17.43■□□□□ 0.38
PSPC1-203ENST00000471658 COPZ1P61923 177 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 ZNF169Q14929 603 aaPredicted RBP17.43■□□□□ 0.38
PSPC1-203ENST00000471658 ATP6AP1Q15904 470 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 Q6ZS92 163 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 OR5M1Q8NGP8 315 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 RNF217Q8TC41 542 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 C3orf49Q96BT1 292 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 ZNF347Q96SE7 839 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 FNDC11Q9BVV2 318 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 TTTY12Q9BZ98 90 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 AGPAT4Q9NRZ5 378 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 MAN2C1Q9NTJ4 1040 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 ACER3Q9NUN7 267 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 DNAJB9Q9UBS3 223 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 SLC7A7Q9UM01 511 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 BOKQ9UMX3 212 aaPredicted RBP17.43■□□□□ 0.38
PSPC1-203ENST00000471658 C15orf41Q9Y2V0 281 aa17.43■□□□□ 0.38
PSPC1-203ENST00000471658 U3KQV3 271 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms