RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 ITLN2Q8WWU7 325 aaPredicted RBP11.18□□□□□ -0.62
CHPF2-202ENST00000465601 ZBTB8AQ96BR9 441 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 RNF145Q96MT1 663 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 TUBA1CQ9BQE3 449 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 TTYH2Q9BSA4 534 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 PIF1Q9H611 641 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 TMEM38AQ9H6F2 299 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 KAT8Q9H7Z6 458 aaKnown RBP11.18□□□□□ -0.62
CHPF2-202ENST00000465601 RLIMQ9NVW2 624 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 GID8Q9NWU2 228 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 ADAM21Q9UKJ8 722 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 ZNF232Q9UNY5 417 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 ASH1LQ9NR48 2969 aaKnown RBP11.17□□□□□ -0.62
CHPF2-202ENST00000465601 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 C7orf72A4D263 438 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 LINC01387J3KSC0 135 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 SEC14L5O43304 696 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 EFNA2O43921 213 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 DNAJA2O60884 412 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 ADAM11O75078 769 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 EPPINO95925 133 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 ZNF17P17021 662 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 PRKCAP17252 672 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 PGCP20142 388 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 IL11P20809 199 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 PSMA4P25789 261 aaKnown RBP11.17□□□□□ -0.62
CHPF2-202ENST00000465601 PTGER4P35408 488 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 EIF1P41567 113 aaKnown RBP11.17□□□□□ -0.62
CHPF2-202ENST00000465601 GZMMP51124 257 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 SMSP52788 366 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 CLDN15P56746 228 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 CLDN20P56880 219 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 LARS2Q15031 903 aaKnown RBP11.17□□□□□ -0.62
CHPF2-202ENST00000465601 BCL2A1Q16548 175 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 LIN52Q52LA3 116 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 PLXDC2Q6UX71 529 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 ZNF836Q6ZNA1 936 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 SEM1Q6ZVN7 128 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 CMIPQ8IY22 773 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 CLIP4Q8N3C7 705 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 ZPLD1Q8TCW7 415 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 RND1Q92730 232 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 TRIB1Q96RU8 372 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 SH3GL1Q99961 368 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 CACYBPQ9HB71 228 aaKnown RBP11.17□□□□□ -0.62
CHPF2-202ENST00000465601 DNAJB12Q9NXW2 375 aaKnown RBP11.17□□□□□ -0.62
CHPF2-202ENST00000465601 ZNF443Q9Y2A4 671 aaPredicted RBP11.17□□□□□ -0.62
CHPF2-202ENST00000465601 GPC6Q9Y625 555 aaPredicted RBP11.17□□□□□ -0.62
CHPF2-202ENST00000465601 AP4B1Q9Y6B7 739 aa11.17□□□□□ -0.62
CHPF2-202ENST00000465601 A1L4Q6 167 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 CDHR4A6H8M9 788 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 AP3D1O14617 1153 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 SHOX2O60902 331 aaPredicted RBP11.16□□□□□ -0.62
CHPF2-202ENST00000465601 FAM107AO95990 144 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 THBS1P07996 1170 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 PABPC4LP0CB38 370 aaKnown RBP11.16□□□□□ -0.62
CHPF2-202ENST00000465601 GKN3PP0CG01 181 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 ETS2P15036 469 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 AQP1P29972 269 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 SESN3P58005 492 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 EEF1A1P68104 462 aaKnown RBP11.16□□□□□ -0.62
CHPF2-202ENST00000465601 ART3Q13508 389 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 SF3B4Q15427 424 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHPF2-202ENST00000465601 ZNF311Q5JNZ3 666 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 NSUN5P2Q63ZY6 315 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 CHMP1BQ7LBR1 199 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 NET1Q7Z628 596 aaPredicted RBP11.16□□□□□ -0.62
CHPF2-202ENST00000465601 SERPINA11Q86U17 422 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 CCDC71Q8IV32 467 aaPredicted RBP11.16□□□□□ -0.62
CHPF2-202ENST00000465601 ZZZ3Q8IYH5 903 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 ZNF808Q8N4W9 903 aaPredicted RBP11.16□□□□□ -0.62
CHPF2-202ENST00000465601 MEIOBQ8N635 442 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 C11orf65Q8NCR3 313 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 HIPK4Q8NE63 616 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 ATP6V1C2Q8NEY4 427 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 OR8J3Q8NGG0 315 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 ZNF563Q8TA94 476 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 SDCCAG3Q96C92 435 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 CMTM5Q96DZ9 223 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 PSMG3-AS1Q96PY0 264 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 ECSITQ9BQ95 431 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 RSPO3Q9BXY4 272 aaPredicted RBP11.16□□□□□ -0.62
CHPF2-202ENST00000465601 TMEM185BQ9H7F4 350 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 CALHM2Q9HA72 323 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 EFCAB1Q9HAE3 211 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 EXOSC3Q9NQT5 275 aaKnown RBP11.16□□□□□ -0.62
CHPF2-202ENST00000465601 ACER3Q9NUN7 267 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 STOML1Q9UBI4 398 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 RNF6Q9Y252 685 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 IFT52Q9Y366 437 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 CHST2Q9Y4C5 530 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 SETXQ7Z333 2677 aaKnown RBP11.16□□□□□ -0.62
CHPF2-202ENST00000465601 CACNA1DQ01668 2161 aa11.16□□□□□ -0.62
CHPF2-202ENST00000465601 A0A0G2JNJ9 132 aa11.15□□□□□ -0.62
CHPF2-202ENST00000465601 CLCA1A8K7I4 914 aa11.15□□□□□ -0.62
CHPF2-202ENST00000465601 EIF1AYO14602 144 aaKnown RBP11.15□□□□□ -0.62
CHPF2-202ENST00000465601 TOXO94900 526 aa11.15□□□□□ -0.62
CHPF2-202ENST00000465601 NTN1O95631 604 aa11.15□□□□□ -0.62
CHPF2-202ENST00000465601 GP1BBP13224 206 aa11.15□□□□□ -0.62
CHPF2-202ENST00000465601 ADH6P28332 368 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms