RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 CBFBQ13951 182 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 GCNT6Q5T4J0 391 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 EEF1A1P5Q5VTE0 462 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 OLIG3Q7RTU3 272 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 MTDHQ86UE4 582 aaKnown RBP11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 KIF18BQ86Y91 864 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 LIX1LQ8IVB5 337 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 MSRB3Q8IXL7 192 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 TMCO5AQ8N6Q1 288 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 TNIP2Q8NFZ5 429 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 OR5W2Q8NH69 310 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 RP9Q8TA86 221 aaKnown RBP11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 WDR60Q8WVS4 1066 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ZG16BQ96DA0 208 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 WDYHV1Q96HA8 205 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ANKRD27Q96NW4 1050 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 TM9SF2Q99805 663 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ARMC7Q9H6L4 198 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 A4GALTQ9NPC4 353 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 KCNE5Q9UJ90 142 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 PRDM4Q9UKN5 801 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 ICAM5Q9UMF0 924 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 VDAC3Q9Y277 283 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 IFT52Q9Y366 437 aa11.96□□□□□ -0.49
RAB11FIP3-207ENST00000461009 LRBAP50851 2863 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 OR2M5A3KFT3 312 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 C7orf72A4D263 438 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 B4DXG7 233 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 FBP2O00757 339 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 UBTFL6P0CB48 400 aaPredicted RBP11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 PGCP20142 388 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 POU3F2P20265 443 aaPredicted RBP11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 SLC6A2P23975 617 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 CTSSP25774 331 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 ADH6P28332 368 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 CCR4P51679 360 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 B3GALT5-AS1P59052 145 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 SRYQ05066 204 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 LARS2Q15031 903 aaKnown RBP11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 MAPK14Q16539 360 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 TRMT5Q32P41 509 aaKnown RBP11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 RETREG3Q86VR2 466 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 SNX32Q86XE0 403 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 KRT73Q86Y46 540 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 GTPBP8Q8N3Z3 284 aaPredicted RBP11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 MEIOBQ8N635 442 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 OR52P1PQ8NH57 321 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 GPR119Q8TDV5 335 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 TMEM234Q8WY98 164 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 RNASE6Q93091 150 aaKnown RBP11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 ARSGQ96EG1 525 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 TMEM19Q96HH6 336 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 ZFP3Q96NJ6 502 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 CPPED1Q9BRF8 314 aaPredicted RBP11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 SPATA5L1Q9BVQ7 753 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 BCL2L10Q9HD36 194 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 MED17Q9NVC6 651 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 ZNF337Q9Y3M9 751 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 L3MBTL1Q9Y468 752 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 GPC6Q9Y625 555 aaPredicted RBP11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 AP4B1Q9Y6B7 739 aa11.95□□□□□ -0.5
RAB11FIP3-207ENST00000461009 ABCA12Q86UK0 2595 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 INTS1Q8N201 2190 aaKnown RBP11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 MBD3L4A6NDZ8 208 aaPredicted RBP11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 MBD3L3A6NE82 208 aaPredicted RBP11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 MBD3L5A6NJ08 208 aaPredicted RBP11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 MRASO14807 208 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 IL18BPO95998 194 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 ARAFP10398 606 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 NID1P14543 1247 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 ZNF708P17019 499 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 ME2P23368 584 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 PGM1P36871 562 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 SLC6A8P48029 635 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 STARP49675 285 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 LHX2P50458 406 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 KRTAP10-9P60411 292 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 RBBP4Q09028 425 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 TMEM44Q2T9K0 475 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 PLPPR5Q32ZL2 321 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 LIN52Q52LA3 116 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 REEP3Q6NUK4 255 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 CBLN3Q6UW01 205 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 SEM1Q6ZVN7 128 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 SLC30A8Q8IWU4 369 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 ZNF440Q8IYI8 595 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 MBD3L2Q8NHZ7 208 aaPredicted RBP11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 BBS10Q8TAM1 723 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 CMTM5Q96DZ9 223 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 ZNF607Q96SK3 696 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 QRSL1Q9H0R6 528 aaKnown RBP11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 TMEM38AQ9H6F2 299 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 ARMCX1Q9P291 453 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 ARL2BPQ9Y2Y0 163 aa11.94□□□□□ -0.5
RAB11FIP3-207ENST00000461009 EEF1E1-BLOC1S5C9J1V9 151 aa11.93□□□□□ -0.5
RAB11FIP3-207ENST00000461009 H3BML4 177 aa11.93□□□□□ -0.5
RAB11FIP3-207ENST00000461009 EEF1E1O43324 174 aaKnown RBP11.93□□□□□ -0.5
RAB11FIP3-207ENST00000461009 PGM3O95394 542 aa11.93□□□□□ -0.5
RAB11FIP3-207ENST00000461009 THBS1P07996 1170 aa11.93□□□□□ -0.5
RAB11FIP3-207ENST00000461009 NUDT7P0C024 238 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms