RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 FJX1Q86VR8 437 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 GATAD2BQ8WXI9 593 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 COL21A1Q96P44 957 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 SDF2Q99470 211 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 SLC29A1Q99808 456 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 PELOQ9BRX2 385 aaKnown RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 WWTR1Q9GZV5 400 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 SLC38A1Q9H2H9 487 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 PIGUQ9H490 435 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 GPN2Q9H9Y4 310 aaPredicted RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 P2RX2Q9UBL9 471 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 GPR55Q9Y2T6 319 aaPredicted RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 ZZEF1O43149 2961 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 LOC102723996A0A087X1L8 192 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 C2orf92A0A1B0GVN3 265 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 H3BNX3 289 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 NKX2-8O15522 239 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 DYRK3O43781 588 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 BCAS1O75363 584 aaPredicted RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 NKX2-2O95096 273 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 OPN1LWP04000 364 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 RAB40ALP0C0E4 278 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 CD46P15529 392 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 EIF2S3P41091 472 aaKnown RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 STARP49675 285 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 PCBP3P57721 371 aaKnown RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 ATP1A4Q13733 1029 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 ZNF630Q2M218 657 aaPredicted RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 HEPHL1Q6MZM0 1159 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 JMJD6Q6NYC1 403 aaPredicted RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 DEGS2Q6QHC5 323 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 FRRS1Q6ZNA5 592 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 ZNF227Q86WZ6 799 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 VRK2Q86Y07 508 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 ADGRG5Q8IZF4 528 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 MORN4Q8NDC4 146 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 OR5M3Q8NGP4 307 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 SNIP1Q8TAD8 396 aaKnown RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 ZNF671Q8TAW3 534 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 TMBIM1Q969X1 311 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 IMMP1LQ96LU5 166 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 LMF2Q9BU23 707 aaKnown RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 PRR14Q9BWN1 585 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 DDX28Q9NUL7 540 aaKnown RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 RLIMQ9NVW2 624 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 P4HTMQ9NXG6 502 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 COPS7AQ9UBW8 275 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 MAGEL2Q9UJ55 1249 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 FBXL4Q9UKA2 621 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 OR10H1Q9Y4A9 318 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 A0A1W2PPL8 197 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 TCRBV3S1A0A5B6 114 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 PRAMEF25A6NGN4 478 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 CENPBD1B2RD01 187 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 ERVH48-1M5A8F1 160 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 CHAF1BQ13112 559 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 CAMK2DQ13557 499 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 RTP5Q14D33 572 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 SPATS1Q496A3 300 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 CYBRD1Q53TN4 286 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 THEM4Q5T1C6 240 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 ATAD3BQ5T9A4 648 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 TYW3Q6IPR3 259 aaKnown RBP9.49□□□□□ -0.89
USP39-210ENST00000459775 TCTN3Q6NUS6 607 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 PIWIL3Q7Z3Z3 882 aaKnown RBP9.49□□□□□ -0.89
USP39-210ENST00000459775 ZNF843Q8N446 348 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 BCORP1Q8N888 145 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 GPR32P1Q8NGA4 272 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 HOXB13Q92826 284 aaPredicted RBP9.49□□□□□ -0.89
USP39-210ENST00000459775 DCBLD2Q96PD2 775 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 THSD1Q9NS62 852 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 DCAF13Q9NV06 445 aaKnown RBP9.49□□□□□ -0.89
USP39-210ENST00000459775 COQ3Q9NZJ6 369 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 PADI2Q9Y2J8 665 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 AP3M1Q9Y2T2 418 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 SPEF1Q9Y4P9 236 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 NSG1A0A0A6YYJ2 146 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 LOC390937A0A1W2PQ73 354 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 GMNNO75496 209 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 DIRAS1O95057 198 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 EPPINO95925 133 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 ITGAMP11215 1152 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 RHCEP18577 417 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 YAP1P46937 504 aaKnown RBP9.49□□□□□ -0.89
USP39-210ENST00000459775 POU6F2P78424 691 aaPredicted RBP9.49□□□□□ -0.89
USP39-210ENST00000459775 RHDQ02161 417 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 PPP1R8Q12972 351 aaKnown RBP9.49□□□□□ -0.89
USP39-210ENST00000459775 BIKQ13323 160 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 VEZF1Q14119 521 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 ARHGAP11BQ3KRB8 267 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 SAPCD1Q5SSQ6 148 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 B3GNTL1Q67FW5 361 aaPredicted RBP9.49□□□□□ -0.89
USP39-210ENST00000459775 HSDL2Q6YN16 418 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 KCTD20Q7Z5Y7 419 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 MRGPREQ86SM8 312 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 RBM45Q8IUH3 476 aaKnown RBP9.49□□□□□ -0.89
USP39-210ENST00000459775 PHC2Q8IXK0 858 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 LILRA2Q8N149 483 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 OR4C3Q8NH37 302 aa9.49□□□□□ -0.89
USP39-210ENST00000459775 RNF145Q96MT1 663 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms