RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 EFSO43281 561 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 REM1O75628 298 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 ZFAND5O76080 213 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 UTS2O95399 124 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 DLGAP3O95886 979 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 EPPINO95925 133 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 NPIPA8P0DM63 369 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 UBL4AP11441 157 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 ZNF28P17035 718 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 NAGAP17050 411 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 ITIH1P19827 911 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 TBXA2RP21731 343 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 CBLP22681 906 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 CD82P27701 267 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 RYKP34925 604 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 NR0B1P51843 470 aaKnown RBP8.22□□□□□ -1.09
VPS50-207ENST00000458530 SLC26A5P58743 744 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 RPS15P62841 145 aaKnown RBP8.22□□□□□ -1.09
VPS50-207ENST00000458530 RNF4P78317 190 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 PIN1Q13526 163 aaPredicted RBP8.22□□□□□ -1.09
VPS50-207ENST00000458530 BLMHQ13867 455 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 NPTX1Q15818 432 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 MAPK14Q16539 360 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 KCTD21Q4G0X4 260 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 TMEM154Q6P9G4 183 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 ZNF730Q6ZMV8 503 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 GALNT5Q7Z7M9 940 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 HMGN2P46Q86SG4 172 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 TSPYL5Q86VY4 417 aaPredicted RBP8.22□□□□□ -1.09
VPS50-207ENST00000458530 RBM45Q8IUH3 476 aaKnown RBP8.22□□□□□ -1.09
VPS50-207ENST00000458530 APLFQ8IW19 511 aaPredicted RBP8.22□□□□□ -1.09
VPS50-207ENST00000458530 CDK20Q8IZL9 346 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 RNF113BQ8IZP6 322 aaKnown RBP8.22□□□□□ -1.09
VPS50-207ENST00000458530 ZNF441Q8N8Z8 693 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 OR4N2Q8NGD1 307 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 OR4K5Q8NGD3 323 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 OR9Q2Q8NGE9 314 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 OR4D11Q8NGI4 311 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 GNPDA2Q8TDQ7 276 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 NACC2Q96BF6 587 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 EFHD2Q96C19 240 aaPredicted RBP8.22□□□□□ -1.09
VPS50-207ENST00000458530 ZG16BQ96DA0 208 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 OMA1Q96E52 524 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 SLC41A3Q96GZ6 507 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 MPP4Q96JB8 637 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 PITX2Q99697 317 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 TEX12Q9BXU0 123 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 UCK2Q9BZX2 261 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 GRIP2Q9C0E4 1043 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 EXOSC3Q9NQT5 275 aaKnown RBP8.22□□□□□ -1.09
VPS50-207ENST00000458530 RHCGQ9UBD6 479 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 SPTBN1Q01082 2364 aaKnown RBP8.22□□□□□ -1.09
VPS50-207ENST00000458530 HEATR5AQ86XA9 2040 aa8.22□□□□□ -1.09
VPS50-207ENST00000458530 SDK2Q58EX2 2172 aa8.21□□□□□ -1.09
VPS50-207ENST00000458530 TRBV4-1A0A0J9YWV2 114 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 A0A1W2PQ72 361 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 HTR3EA5X5Y0 456 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 OR6C70A6NIJ9 312 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 C21orf140B9A014 251 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 FRS3O43559 492 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 CHP2O43745 196 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 MPZL2O60487 215 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 SEC24DO94855 1032 aaPredicted RBP8.21□□□□□ -1.1
VPS50-207ENST00000458530 IGKV1D-16P01601 117 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 ICAM2P13598 275 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 OSMP13725 252 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 MMP11P24347 488 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 ABCD3P28288 659 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 RBM34P42696 430 aaKnown RBP8.21□□□□□ -1.1
VPS50-207ENST00000458530 GPR143P51810 404 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 ZNF136P52737 540 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 CDC42P60953 191 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 RPP38P78345 283 aaKnown RBP8.21□□□□□ -1.1
VPS50-207ENST00000458530 ALDH6A1Q02252 535 aaKnown RBP8.21□□□□□ -1.1
VPS50-207ENST00000458530 TEKQ02763 1124 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 CLN3Q13286 438 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 OR1Q1Q15612 314 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 KLHL26Q53HC5 615 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 RBM48Q5RL73 367 aaKnown RBP8.21□□□□□ -1.1
VPS50-207ENST00000458530 ZNF691Q5VV52 312 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 ZNF770Q6IQ21 691 aaPredicted RBP8.21□□□□□ -1.1
VPS50-207ENST00000458530 PODNL1Q6PEZ8 512 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 CD300LDQ6UXZ3 194 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 PRICKLE2Q7Z3G6 844 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 GDF7Q7Z4P5 450 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 COMTD1Q86VU5 262 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 DND1Q8IYX4 353 aaKnown RBP8.21□□□□□ -1.1
VPS50-207ENST00000458530 ZNF786Q8N393 782 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 SLC15A4Q8N697 577 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 TMCO5AQ8N6Q1 288 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 ZNF321PQ8N8H1 164 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 APCDD1LQ8NCL9 501 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 NFAM1Q8NET5 270 aaPredicted RBP8.21□□□□□ -1.1
VPS50-207ENST00000458530 PHOSPHO1Q8TCT1 267 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 SLC7A13Q8TCU3 470 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 DNAJA4Q8WW22 397 aaPredicted RBP8.21□□□□□ -1.1
VPS50-207ENST00000458530 HDAC2Q92769 488 aaKnown RBP8.21□□□□□ -1.1
VPS50-207ENST00000458530 TMCO6Q96DC7 493 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 HRASLS5Q96KN8 279 aa8.21□□□□□ -1.1
VPS50-207ENST00000458530 BARD1Q99728 777 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms