RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 PAGE3Q5JUK9 113 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 EEF1A1P5Q5VTE0 462 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 PRAMEF8Q5VWM4 474 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 PRAMEF7Q5VXH5 474 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 SP5Q6BEB4 398 aaPredicted RBP13.97□□□□□ -0.17
VPS8-213ENST00000453056 OR2A2Q6IF42 318 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 ESPNLQ6ZVH7 1005 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 SLC38A5Q8WUX1 472 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 TMEM19Q96HH6 336 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 TREX2Q9BQ50 279 aaPredicted RBP13.97□□□□□ -0.17
VPS8-213ENST00000453056 SFXN3Q9BWM7 321 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 PINK1Q9BXM7 581 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 UCK2Q9BZX2 261 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 QRSL1Q9H0R6 528 aaKnown RBP13.97□□□□□ -0.17
VPS8-213ENST00000453056 TMEM185BQ9H7F4 350 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 A4GALTQ9NPC4 353 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 SLC52A3Q9NQ40 469 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 SLC25A37Q9NYZ2 338 aa13.97□□□□□ -0.17
VPS8-213ENST00000453056 ITPR2Q14571 2701 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 MPDZO75970 2070 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 DYNC1I1O14576 645 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 RCBTB2O95199 551 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 NID1P14543 1247 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 PRKCAP17252 672 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 PSMA4P25789 261 aaKnown RBP13.96□□□□□ -0.17
VPS8-213ENST00000453056 EIF1AXP47813 144 aaKnown RBP13.96□□□□□ -0.17
VPS8-213ENST00000453056 ASCL1P50553 236 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 ZNF136P52737 540 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 SF3A3Q12874 501 aaKnown RBP eCLIP13.96□□□□□ -0.17
VPS8-213ENST00000453056 NFYCQ13952 458 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 LARS2Q15031 903 aaKnown RBP13.96□□□□□ -0.17
VPS8-213ENST00000453056 ZSWIM7Q19AV6 140 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 ZNF787Q6DD87 383 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 CGB2Q6NT52 195 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 PPP4R4Q6NUP7 873 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 HMGN2P46Q86SG4 172 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 GGNQ86UU5 652 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 MSRB3Q8IXL7 192 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 ZNF440Q8IYI8 595 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 DPP10Q8N608 796 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 NAXEQ8NCW5 288 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 OR2V1Q8NHB1 315 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 FBXO27Q8NI29 283 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 ZNF563Q8TA94 476 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 BBS10Q8TAM1 723 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 POC1BQ8TC44 478 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 KLHL15Q96M94 604 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 ZNF317Q96PQ6 595 aaPredicted RBP13.96□□□□□ -0.17
VPS8-213ENST00000453056 KLHDC3Q9BQ90 382 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 THUMPD3Q9BV44 507 aaKnown RBP13.96□□□□□ -0.17
VPS8-213ENST00000453056 NSRP1Q9H0G5 558 aaKnown RBP13.96□□□□□ -0.17
VPS8-213ENST00000453056 ARMC7Q9H6L4 198 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 VAPAQ9P0L0 249 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 MCTS1Q9ULC4 181 aaKnown RBP13.96□□□□□ -0.17
VPS8-213ENST00000453056 GMEB1Q9Y692 573 aa13.96□□□□□ -0.17
VPS8-213ENST00000453056 DSPPQ9NZW4 1301 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 TRBV5-3A0A0A0MS03 114 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 A0A0G2JPF8 293 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 HNRNPCL2B2RXH8 293 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 HNRNPCL3B7ZW38 293 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 EEF1E1-BLOC1S5C9J1V9 151 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 EEF1E1O43324 174 aaKnown RBP13.95□□□□□ -0.18
VPS8-213ENST00000453056 HNRNPCL1O60812 293 aaKnown RBP13.95□□□□□ -0.18
VPS8-213ENST00000453056 DNAJA2O60884 412 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 SYNGR4O95473 234 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 CRHP06850 196 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 THBS1P07996 1170 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 TFPTP0C1Z6 253 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 HNRNPCL4P0DMR1 293 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 SLC7A1P30825 629 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 SFTPDP35247 375 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 SUCLG1P53597 346 aaKnown RBP13.95□□□□□ -0.18
VPS8-213ENST00000453056 CLDN15P56746 228 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 PON3Q15166 354 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 TOMM34Q15785 309 aaPredicted RBP13.95□□□□□ -0.18
VPS8-213ENST00000453056 SLC25A53Q5H9E4 307 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 MRPL2Q5T653 305 aaKnown RBP13.95□□□□□ -0.18
VPS8-213ENST00000453056 C3orf33Q6P1S2 294 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 LILRA2Q8N149 483 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 OR52P1PQ8NH57 321 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 OR10D3Q8NH80 312 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 MARVELD3Q96A59 401 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 INTS12Q96CB8 462 aaKnown RBP13.95□□□□□ -0.18
VPS8-213ENST00000453056 ZG16BQ96DA0 208 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 SPOCK3Q9BQ16 436 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 CPPED1Q9BRF8 314 aaPredicted RBP13.95□□□□□ -0.18
VPS8-213ENST00000453056 PRRG4Q9BZD6 226 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 SLC24A3Q9HC58 644 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 TIGARQ9NQ88 270 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 SERINC1Q9NRX5 453 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 ACER3Q9NUN7 267 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 SLAMF8Q9P0V8 285 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 ZNF232Q9UNY5 417 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 IFT52Q9Y366 437 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 SPIN1Q9Y657 262 aaPredicted RBP13.95□□□□□ -0.18
VPS8-213ENST00000453056 CAPN7Q9Y6W3 813 aa13.95□□□□□ -0.18
VPS8-213ENST00000453056 CELSR2Q9HCU4 2923 aa13.94□□□□□ -0.18
VPS8-213ENST00000453056 BBIP1A8MTZ0 92 aa13.94□□□□□ -0.18
VPS8-213ENST00000453056 H0YC42 278 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms