RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ZFP3Q96NJ6 502 aa17.89■□□□□ 0.45
HMGA1-205ENST00000447654 ALX4Q9H161 411 aaPredicted RBP17.89■□□□□ 0.45
HMGA1-205ENST00000447654 A0A1B0GWJ7 208 aa17.88■□□□□ 0.45
HMGA1-205ENST00000447654 RFXAPO00287 272 aa17.88■□□□□ 0.45
HMGA1-205ENST00000447654 INSIG1O15503 277 aa17.88■□□□□ 0.45
HMGA1-205ENST00000447654 CLN5O75503 358 aa17.88■□□□□ 0.45
HMGA1-205ENST00000447654 DEFA6Q01524 100 aa17.88■□□□□ 0.45
HMGA1-205ENST00000447654 TWF1Q12792 350 aa17.88■□□□□ 0.45
HMGA1-205ENST00000447654 NFATC2Q13469 925 aa17.88■□□□□ 0.45
HMGA1-205ENST00000447654 MAPK14Q16539 360 aa17.88■□□□□ 0.45
HMGA1-205ENST00000447654 TCTN3Q6NUS6 607 aa17.88■□□□□ 0.45
HMGA1-205ENST00000447654 ZNF783Q6ZMS7 281 aa17.88■□□□□ 0.45
HMGA1-205ENST00000447654 CELF5Q8N6W0 485 aaKnown RBP17.88■□□□□ 0.45
HMGA1-205ENST00000447654 OVCA2Q8WZ82 227 aa17.88■□□□□ 0.45
HMGA1-205ENST00000447654 PLD4Q96BZ4 506 aa17.88■□□□□ 0.45
HMGA1-205ENST00000447654 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.87■□□□□ 0.45
HMGA1-205ENST00000447654 A0A1W2PRQ8 180 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 NME6O75414 186 aaPredicted RBP17.87■□□□□ 0.45
HMGA1-205ENST00000447654 GATBO75879 557 aaKnown RBP17.87■□□□□ 0.45
HMGA1-205ENST00000447654 IGF2P01344 180 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 ASGR2P07307 311 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 FPR3P25089 353 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 CXADRP78310 365 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 ZNF177Q13360 481 aaPredicted RBP17.87■□□□□ 0.45
HMGA1-205ENST00000447654 INSL4Q14641 139 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 SFRP4Q6FHJ7 346 aaPredicted RBP17.87■□□□□ 0.45
HMGA1-205ENST00000447654 REEP3Q6NUK4 255 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 RELL2Q8NC24 303 aaPredicted RBP17.87■□□□□ 0.45
HMGA1-205ENST00000447654 EDEM2Q9BV94 578 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 MFRPQ9BY79 579 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 RPH3AQ9Y2J0 694 aaPredicted RBP17.87■□□□□ 0.45
HMGA1-205ENST00000447654 A0A1B0GVC2 190 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 A6NIN4 97 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 UBE2IP63279 158 aaKnown RBP17.87■□□□□ 0.45
HMGA1-205ENST00000447654 SIM1P81133 766 aaPredicted RBP17.87■□□□□ 0.45
HMGA1-205ENST00000447654 OR2B11Q5JQS5 317 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 SLC39A11Q8N1S5 342 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 TTC16Q8NEE8 873 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 WRAP53Q9BUR4 548 aaKnown RBP17.87■□□□□ 0.45
HMGA1-205ENST00000447654 SEC11CQ9BY50 192 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 KLHL42Q9P2K6 505 aa17.87■□□□□ 0.45
HMGA1-205ENST00000447654 RANBP2P49792 3224 aaKnown RBP17.86■□□□□ 0.45
HMGA1-205ENST00000447654 TRBV23-1A0A0A0MS06 115 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 GPR39O43194 453 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 RDH16O75452 317 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 PRAMEF12O95522 483 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 SHC1P29353 583 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 HCCSP53701 268 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 LIPJQ5W064 366 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 CXXC5Q7LFL8 322 aaKnown RBP17.86■□□□□ 0.45
HMGA1-205ENST00000447654 TCTEX1D2Q8WW35 142 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 RAB7BQ96AH8 199 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 ZNF689Q96CS4 500 aaPredicted RBP17.86■□□□□ 0.45
HMGA1-205ENST00000447654 GHRLQ9UBU3 117 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 DOCK6Q96HP0 2047 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 KIAA1671Q9BY89 1806 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 RFPL4AA6NLU0 287 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 RHPN2P1A8MT19 583 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 RFPL4AL1F8VTS6 287 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 GABARAPH6UMI1 98 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 KRT33AO76009 404 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 NOS3P29474 1203 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 GCGRP47871 477 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 CDH11P55287 796 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 MRPS10P82664 201 aaKnown RBP17.86■□□□□ 0.45
HMGA1-205ENST00000447654 PEA15Q15121 130 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 SLC5A12Q1EHB4 618 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 TXNDC8Q6A555 127 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 OR7E24Q6IFN5 339 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 C1orf94Q6P1W5 598 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 C15orf54Q8N8G6 183 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 CPNE4Q96A23 557 aaPredicted RBP17.86■□□□□ 0.45
HMGA1-205ENST00000447654 PBX4Q9BYU1 374 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 FAM117AQ9C073 453 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 BRF2Q9HAW0 419 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 KLHL1Q9NR64 748 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 MED17Q9NVC6 651 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 TBX21Q9UL17 535 aa17.86■□□□□ 0.45
HMGA1-205ENST00000447654 GSAPA4D1B5 854 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 NDUFB6O95139 128 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 ABOP16442 354 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 HOXA6P31267 233 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 CCR7P32248 378 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 SLC6A12P48065 614 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 RAB4BP61018 213 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 SMAD3P84022 425 aaKnown RBP17.85■□□□□ 0.45
HMGA1-205ENST00000447654 ZNF345Q14585 488 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 ZNF613Q6PF04 617 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 KLBQ86Z14 1044 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 CFAP206Q8IYR0 622 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 ZNF561Q8N587 486 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 SLC7A13Q8TCU3 470 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 PFDN5Q99471 154 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 BPIFA1Q9NP55 256 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 RCE1Q9Y256 329 aa17.85■□□□□ 0.45
HMGA1-205ENST00000447654 LOC390937A0A1W2PQ73 354 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 K7ERQ8 282 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 LILRB5O75023 590 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 TMEM127O75204 238 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 SLC25A14O95258 325 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms