RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 FN3KQ9H479 309 aa9.32□□□□□ -0.92
CASP4-203ENST00000444739 SLC6A20Q9NP91 592 aa9.32□□□□□ -0.92
CASP4-203ENST00000444739 PURGQ9UJV8 347 aaKnown RBP9.32□□□□□ -0.92
CASP4-203ENST00000444739 KCNK7Q9Y2U2 307 aa9.32□□□□□ -0.92
CASP4-203ENST00000444739 PRKAB1Q9Y478 270 aa9.32□□□□□ -0.92
CASP4-203ENST00000444739 PCDHGA5Q9Y5G8 931 aa9.32□□□□□ -0.92
CASP4-203ENST00000444739 OBSL1O75147 1896 aa9.32□□□□□ -0.92
CASP4-203ENST00000444739 DENND4AQ7Z401 1863 aa9.32□□□□□ -0.92
CASP4-203ENST00000444739 A0A1W2PPK0 400 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 GABARAPH6UMI1 98 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 J3QLW9 94 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 FLRT2O43155 660 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 POP4O95707 220 aaKnown RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 FGBP02675 491 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 ZNF19P17023 458 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 MECP2P51608 486 aaKnown RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 OR12D2P58182 307 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 MAT1AQ00266 395 aaKnown RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 ZNF85Q03923 595 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 FGL1Q08830 312 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 TMEM115Q12893 351 aaPredicted RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 MELKQ14680 651 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 LINC00303Q3SY05 128 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 ZNF311Q5JNZ3 666 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 PRPF38BQ5VTL8 546 aaKnown RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 OLFML2AQ68BL7 652 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 SLC8B1Q6J4K2 584 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 MBOAT2Q6ZWT7 520 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 LSRQ86X29 649 aaPredicted RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 VRK2Q86Y07 508 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 PM20D2Q8IYS1 436 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 FIBINQ8TAL6 211 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 BCL7CQ8WUZ0 217 aaPredicted RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 HMGB4Q8WW32 186 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 GHSRQ92847 366 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 ZG16BQ96DA0 208 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 OR1F2PQ96R84 312 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 C12orf57Q99622 126 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 SMAD5Q99717 465 aaKnown RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 MFRPQ9BY79 579 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 RHBGQ9H310 441 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 MED11Q9P086 117 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 AKAP7Q9P0M2 348 aaPredicted RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 OPN4Q9UHM6 478 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 HS3ST2Q9Y278 367 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 KCNE3Q9Y6H6 103 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 CDHR4A6H8M9 788 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 STX11O75558 287 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 AQP8O94778 261 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 NT5EP21589 574 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 MST1P26927 711 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 MAT2AP31153 395 aaKnown RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 PTGER1P34995 402 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 PRKAG1P54619 331 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 FXYD6P3P58550 94 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 AP3S2P59780 193 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 S100A12P80511 92 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 GPNMBQ14956 572 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 KCNA10Q16322 511 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 PRAMEF14Q5SWL7 426 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 PRAMEF13Q5VWM6 474 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 FAM199XQ6PEV8 388 aaPredicted RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 GDF7Q7Z4P5 450 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 LRRTM4Q86VH4 590 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 ARL14EPQ8N8R7 260 aaPredicted RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 OR5J2Q8NH18 312 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 BRIX1Q8TDN6 353 aaKnown RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 SETD7Q8WTS6 366 aaKnown RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 TMEM255BQ8WV15 326 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 GLYATL1Q969I3 302 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 ZNF689Q96CS4 500 aaPredicted RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 TRMT2BQ96GJ1 504 aaKnown RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 CMTM3Q96MX0 182 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 ZCCHC2Q9C0B9 1178 aaKnown RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 SLC38A1Q9H2H9 487 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 GPN1Q9HCN4 374 aaPredicted RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 ZNF304Q9HCX3 659 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 NFKBIL1Q9UBC1 381 aaPredicted RBP9.31□□□□□ -0.92
CASP4-203ENST00000444739 ST6GALNAC2Q9UJ37 374 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 SLC6A5Q9Y345 797 aa9.31□□□□□ -0.92
CASP4-203ENST00000444739 MDC1Q14676 2089 aaKnown RBP9.3□□□□□ -0.92
CASP4-203ENST00000444739 ANKRD20A5PA0PJZ0 165 aa9.3□□□□□ -0.92
CASP4-203ENST00000444739 ANTXRLA6NF34 631 aa9.3□□□□□ -0.92
CASP4-203ENST00000444739 LINC01387J3KSC0 135 aa9.3□□□□□ -0.92
CASP4-203ENST00000444739 KRT33AO76009 404 aa9.3□□□□□ -0.92
CASP4-203ENST00000444739 PCDH8O95206 1070 aa9.3□□□□□ -0.92
CASP4-203ENST00000444739 IGF2P01344 180 aa9.3□□□□□ -0.92
CASP4-203ENST00000444739 HMGN2P05204 90 aaKnown RBP9.3□□□□□ -0.92
CASP4-203ENST00000444739 MRPL3P09001 348 aaKnown RBP9.3□□□□□ -0.92
CASP4-203ENST00000444739 PTNP21246 168 aa9.3□□□□□ -0.92
CASP4-203ENST00000444739 RPL35P42766 123 aaKnown RBP9.3□□□□□ -0.92
CASP4-203ENST00000444739 RECQLP46063 649 aaPredicted RBP9.3□□□□□ -0.92
CASP4-203ENST00000444739 H2BFSP57053 126 aa9.3□□□□□ -0.92
CASP4-203ENST00000444739 POLR2LP62875 67 aaKnown RBP9.3□□□□□ -0.92
CASP4-203ENST00000444739 ELAVL2Q12926 359 aaKnown RBP9.3□□□□□ -0.92
CASP4-203ENST00000444739 IL10RAQ13651 578 aa9.3□□□□□ -0.92
CASP4-203ENST00000444739 LASP1Q14847 261 aaKnown RBP9.3□□□□□ -0.92
CASP4-203ENST00000444739 ZNF805Q5CZA5 627 aa9.3□□□□□ -0.92
CASP4-203ENST00000444739 PRAMEF8Q5VWM4 474 aa9.3□□□□□ -0.92
CASP4-203ENST00000444739 PRAMEF7Q5VXH5 474 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms