RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 DPYSL5Q9BPU6 564 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 SIGLEC7Q9Y286 467 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 ASXL3Q9C0F0 2248 aa23.66■■□□□ 1.38
CPNE1-216ENST00000437340 TMEM129A0AVI4 362 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 BHLHE40O14503 412 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 PTNP21246 168 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 TGFBR1P36897 503 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 OPRL1P41146 370 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 ARHGAP40Q5TG30 622 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 PRAMEF17Q5VTA0 474 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 GDPGP1Q6ZNW5 385 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 CACTIN-AS1Q8N1I8 211 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 LNX2Q8N448 690 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 SAP25Q8TEE9 199 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 ART5Q96L15 291 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 HMG20AQ9NP66 347 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 MKKSQ9NPJ1 570 aaPredicted RBP23.65■■□□□ 1.38
CPNE1-216ENST00000437340 RPS6KB2Q9UBS0 482 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 SRPK3Q9UPE1 567 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 A3GALT2U3KPV4 340 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 FRG2CA6NGY1 282 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 CLDN25C9JDP6 229 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 KPNA4O00629 521 aaPredicted RBP23.65■■□□□ 1.38
CPNE1-216ENST00000437340 HCN1O60741 890 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 IL33O95760 270 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 DDAH2O95865 285 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 HBQ1P09105 142 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 ANKRD34CP0C6C1 535 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 HTR1FP30939 366 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 DCAF7P61962 342 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 ZNF846Q147U1 533 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 ZNF527Q8NB42 609 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 OR6Q1Q8NGQ2 317 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 SLC2A12Q8TD20 617 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 CHCHD6Q9BRQ6 235 aa23.65■■□□□ 1.38
CPNE1-216ENST00000437340 WDR12Q9GZL7 423 aaKnown RBP23.65■■□□□ 1.38
CPNE1-216ENST00000437340 MRTO4Q9UKD2 239 aaKnown RBP23.65■■□□□ 1.38
CPNE1-216ENST00000437340 UNC13CQ8NB66 2214 aa23.64■■□□□ 1.38
CPNE1-216ENST00000437340 LOC100506127A0A0U1RQW1 187 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 CFIP05156 583 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 LCN1P31025 176 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 DOC2BQ14184 412 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 LPAL2Q16609 132 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 SMARCD3Q6STE5 483 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 GATAD2AQ86YP4 633 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 AMER2Q8N7J2 671 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 FAM71CQ8NEG0 241 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 OR14A16Q8NHC5 309 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 ZNF721Q8TF20 911 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 DNAJA4Q8WW22 397 aaPredicted RBP23.64■■□□□ 1.37
CPNE1-216ENST00000437340 LCORQ96JN0 433 aaPredicted RBP23.64■■□□□ 1.37
CPNE1-216ENST00000437340 OR8D2Q9GZM6 311 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 ISYNA1Q9NPH2 558 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 AKIP1Q9NQ31 210 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 UBQLN4Q9NRR5 601 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 CCDC59Q9P031 241 aaKnown RBP23.64■■□□□ 1.37
CPNE1-216ENST00000437340 H2AFY2Q9P0M6 372 aaPredicted RBP23.64■■□□□ 1.37
CPNE1-216ENST00000437340 IL20RAQ9UHF4 553 aa23.64■■□□□ 1.37
CPNE1-216ENST00000437340 PATE3B3GLJ2 98 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 YKT6O15498 198 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 PTP4A3O75365 173 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 SAGP10523 405 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-216ENST00000437340 CALRP27797 417 aaKnown RBP23.63■■□□□ 1.37
CPNE1-216ENST00000437340 ETV5P41161 510 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 ETV1P50549 477 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 GPR143P51810 404 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 ACY1Q03154 408 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 GID4Q8IVV7 300 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 ZNF321PQ8N8H1 164 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 FAM181AQ8N9Y4 354 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 OR9Q1Q8NGQ5 310 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 DAZLQ92904 295 aaKnown RBP23.63■■□□□ 1.37
CPNE1-216ENST00000437340 CCNL2Q96S94 520 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-216ENST00000437340 CENPOQ9BU64 300 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 SEC14L4Q9UDX3 406 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 BAIAP2Q9UQB8 552 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 EXOGQ9Y2C4 368 aaKnown RBP23.63■■□□□ 1.37
CPNE1-216ENST00000437340 RFPL3O75679 317 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 WNT4P56705 351 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 COPZ1P61923 177 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 FNDC7Q5VTL7 733 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 PAQR6Q6TCH4 344 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 KIRREL2Q6UWL6 708 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 ADIPOR1Q96A54 375 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 CLIP3Q96DZ5 547 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 NXF5Q9H1B4 397 aaKnown RBP23.63■■□□□ 1.37
CPNE1-216ENST00000437340 MMP27Q9H306 513 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 NDUFB11Q9NX14 153 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 B3GNT3Q9Y2A9 372 aa23.63■■□□□ 1.37
CPNE1-216ENST00000437340 NUP210LQ5VU65 1888 aa23.62■■□□□ 1.37
CPNE1-216ENST00000437340 LY6G6EA0A0G2JKS1 128 aa23.62■■□□□ 1.37
CPNE1-216ENST00000437340 A8MUA0 341 aa23.62■■□□□ 1.37
CPNE1-216ENST00000437340 PSMA1P25786 263 aaKnown RBP23.62■■□□□ 1.37
CPNE1-216ENST00000437340 NSDHLQ15738 373 aa23.62■■□□□ 1.37
CPNE1-216ENST00000437340 VWA2Q5GFL6 755 aa23.62■■□□□ 1.37
CPNE1-216ENST00000437340 RHBDD2Q6NTF9 364 aa23.62■■□□□ 1.37
CPNE1-216ENST00000437340 CXXC5Q7LFL8 322 aaKnown RBP23.62■■□□□ 1.37
CPNE1-216ENST00000437340 CADM2Q8N3J6 435 aa23.62■■□□□ 1.37
CPNE1-216ENST00000437340 OR13C2Q8NGS9 318 aa23.62■■□□□ 1.37
CPNE1-216ENST00000437340 EFHD2Q96C19 240 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms