RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 PCDHGA5Q9Y5G8 931 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 SCN2AQ99250 2005 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 ARID1BQ8NFD5 2236 aaPredicted RBP11.84□□□□□ -0.51
DDX56-204ENST00000431640 IGHV5-51A0A0C4DH38 117 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 HTR3EA5X5Y0 456 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 LOC110117498-PIK3R3F6TDL0 507 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 MAGEB3O15480 346 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 DYRK3O43781 588 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 PTP4A3O75365 173 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 CH25HO95992 272 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 IFNA16P05015 189 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 CD1CP29017 333 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 SSTR4P31391 388 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 ATP6V1E1P36543 226 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 ETV6P41212 452 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 SOX3P41225 446 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 ARL4DP49703 201 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 BTG2P78543 158 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 MAT1AQ00266 395 aaKnown RBP11.84□□□□□ -0.51
DDX56-204ENST00000431640 RUNX1T1Q06455 604 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 ACSM1Q08AH1 577 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 KRR1Q13601 381 aaKnown RBP11.84□□□□□ -0.51
DDX56-204ENST00000431640 ATP1A4Q13733 1029 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 SOWAHCQ53LP3 525 aaPredicted RBP11.84□□□□□ -0.51
DDX56-204ENST00000431640 LIPKQ5VXJ0 399 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 ULK3Q6PHR2 472 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 SMARCD3Q6STE5 483 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 CXXC5Q7LFL8 322 aaKnown RBP11.84□□□□□ -0.51
DDX56-204ENST00000431640 ZNF554Q86TJ5 538 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 PLXDC1Q8IUK5 500 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 SHISA5Q8N114 240 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 LNX2Q8N448 690 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 KLHL36Q8N4N3 616 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 DRAXINQ8NBI3 349 aaPredicted RBP11.84□□□□□ -0.51
DDX56-204ENST00000431640 RCBTB1Q8NDN9 531 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 UFD1Q92890 307 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 COQ7Q99807 217 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 ARHGAP9Q9BRR9 750 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 SPRTNQ9H040 489 aaPredicted RBP11.84□□□□□ -0.51
DDX56-204ENST00000431640 RNF167Q9H6Y7 350 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 LRIT1Q9P2V4 623 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 RPS6KB2Q9UBS0 482 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 GMEB2Q9UKD1 530 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 CBLCQ9ULV8 474 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 GSTK1Q9Y2Q3 226 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 SPIN1Q9Y657 262 aaPredicted RBP11.84□□□□□ -0.51
DDX56-204ENST00000431640 CSNK1G3Q9Y6M4 447 aa11.84□□□□□ -0.51
DDX56-204ENST00000431640 EFCAB7A8K855 629 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 NPIPB9F8W1W9 429 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 TGFBR3LH3BV60 316 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 BHLHE40O14503 412 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 SLC30A4O14863 429 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 NUDT21O43809 227 aaKnown RBP11.83□□□□□ -0.52
DDX56-204ENST00000431640 SNX4O95219 450 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 NTN1O95631 604 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 IL1AP01583 271 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 IGHA1P01876 353 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 MAKP20794 623 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 PAICSP22234 425 aaKnown RBP11.83□□□□□ -0.52
DDX56-204ENST00000431640 ACAA2P42765 397 aaKnown RBP11.83□□□□□ -0.52
DDX56-204ENST00000431640 SLC1A3P43003 542 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 RFX3P48380 749 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 ARRB1P49407 418 aaPredicted RBP11.83□□□□□ -0.52
DDX56-204ENST00000431640 GPR143P51810 404 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 HSD11B2P80365 405 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 ERV3-1Q14264 604 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.83□□□□□ -0.52
DDX56-204ENST00000431640 SPANXN2Q5MJ10 180 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 PAQR6Q6TCH4 344 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 HSDL2Q6YN16 418 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 WDR88Q6ZMY6 472 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 RTL4Q6ZR62 310 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 MEPCEQ7L2J0 689 aaKnown RBP11.83□□□□□ -0.52
DDX56-204ENST00000431640 BTLAQ7Z6A9 289 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 CPOQ8IVL8 374 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 ZNF614Q8N883 585 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 OR52N1Q8NH53 320 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 PFN4Q8NHR9 129 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 CEP19Q96LK0 163 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 OR1F2PQ96R84 312 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 CCNL2Q96S94 520 aaPredicted RBP11.83□□□□□ -0.52
DDX56-204ENST00000431640 PHOX2BQ99453 314 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 GTPBP2Q9BX10 602 aaKnown RBP11.83□□□□□ -0.52
DDX56-204ENST00000431640 RBCK1Q9BYM8 510 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 DNAJB12Q9NXW2 375 aaKnown RBP11.83□□□□□ -0.52
DDX56-204ENST00000431640 TNFRSF10DQ9UBN6 386 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 MRTO4Q9UKD2 239 aaKnown RBP11.83□□□□□ -0.52
DDX56-204ENST00000431640 ERVK-19Q9WJR5 959 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 SIGLEC7Q9Y286 467 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 SLC35A3Q9Y2D2 325 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 OR10H1Q9Y4A9 318 aa11.83□□□□□ -0.52
DDX56-204ENST00000431640 OTOGLQ3ZCN5 2332 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 A0A1B0GWA3 101 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 CDC123O75794 336 aaPredicted RBP11.82□□□□□ -0.52
DDX56-204ENST00000431640 UPK1BO75841 260 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 OR2B3O76000 313 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 IGKV1D-16P01601 117 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 ZGLP1P0C6A0 271 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 LIMS3P0CW19 117 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 LIMS4P0CW20 117 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms